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Crystal Structure of domain swapped human Nck SH3.1, 1.01A, monoclinic

Analyse Crystal Structure of domain swapped human Nck SH3.1, 1.01A, monoclinic in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
5QU3
Type
protein
Length
113 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v2 / PDB Bank
Contract
0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner
0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution
1.02
Source
Homo sapiens
Molecule
Cytoplasmic protein NCK1
UniProt
P16333

Structure

x-ray diffraction · resolution 1.02 · 2 distinct chains · 5% helix, 42% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ACytoplasmic protein NCK1protein575% helix, 42% strandP16333
BCytoplasmic protein NCK1protein565% helix, 43% strandP16333

Interfaces

1 interface between chains.

  • A–B · 2199 Ų buried · 24 hydrogen bonds · protein-protein

Compared structures

  • 5QU3 · Crystal structure of domain swapped human nck SH3.1, 1.01A, monoclinic · the same entry in another collection · chain A against A, TM-score 1.00
  • P16333 · AlphaFold monomer V2.0 prediction for cytoplasmic protein NCK1 (P16333) · a predicted model of the same protein · chain B against A, TM-score 0.57

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