Research workbench
Structure of the Legionella effector, AnkB, in complex with human Skp1
Analyse Structure of the Legionella effector, AnkB, in complex with human Skp1 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 5K35
- Type
- protein
- Length
- 310 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.85
- Source
- Homo sapiens; Legionella pneumophila
- Molecule
- Ankyrin-repeat protein B; S-phase kinase-associated protein 1
- UniProt
- A0A0A1EKG3, P63208
Structure
x-ray diffraction · resolution 2.85 · 2 distinct chains · 57% helix, 4% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ankyrin-repeat protein B | protein | 164 | 60% helix, 0% strand | A0A0A1EKG3 |
| B | S-phase kinase-associated protein 1 | protein | 146 | 54% helix, 8% strand | P63208 |
Interfaces
1 interface between chains.
- A–B · 1634 Ų buried · 14 hydrogen bonds · protein-protein
Compared structures
- 5K35 · Structure of the legionella effector, ankb, in complex with human SKP1 · the same entry in another collection · chain A against A, TM-score 1.00
- P63208 · AlphaFold monomer V2.0 prediction for S-phase kinase-associated protein 1 (P63208) · a predicted model of the same protein · chain B against A, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A0A1EKG3
- Every structure of UniProt P63208
- Elsewhere: RCSB PDB 5K35 · PDBe 5K35 · UniProt A0A0A1EKG3 · UniProt P63208
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