Research workbench
Crystal structure of ragweed allergen Amb a 8
Analyse Crystal structure of ragweed allergen Amb a 8 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 5EM1
- Type
- protein
- Length
- 135 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.45
- Source
- Ambrosia artemisiifolia
- Molecule
- Profilin
- UniProt
- Q2KN24
- Ligands
- BEZ, CL
Structure
x-ray diffraction · resolution 1.45 · 1 distinct chain · 27% helix, 32% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Profilin | protein | 135 | 27% helix, 32% strand | Q2KN24 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 8 modified, 1 disulfide (methylation, disulfide, artifact).
Compared structures
- 5EM1 · Crystal structure of ragweed allergen amb a 8 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q2KN24
- Elsewhere: RCSB PDB 5EM1 · PDBe 5EM1 · UniProt Q2KN24
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.