MolNFT v1 · #117900 · protein
Crystal structure of ragweed allergen amb a 8
5EM1 · Profilin: “Crystal structure of ragweed allergen amb a 8”. X-ray diffraction, 2 ligands (BEZ, CL). MolNFT v1 #117900 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5EM1
- Type
- protein
- Length
- 135 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Profilin
- UniProt
- Q2KN24
- Ligands
- BEZ, CL
Structure
x-ray diffraction · 1 distinct chain · 27% helix, 32% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Profilin | protein | 135 | 27% helix, 32% strand | Q2KN24 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 8 modified, 1 disulfide (methylation, disulfide, artifact).
Compared structures
- 5EM1 · Crystal structure of ragweed allergen Amb a 8 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q2KN24
- Elsewhere: RCSB PDB 5EM1 · PDBe 5EM1 · UniProt Q2KN24
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