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Structure of UbiX in complex with oxidised prenylated FMN (radical)

Analyse Structure of UbiX in complex with oxidised prenylated FMN (radical) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 4ZAX
Type: protein
Length: 207 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v2 / PDB Bank
Contract: 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner: 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution: 1.61
Source: Pseudomonas aeruginosa
Molecule: UbiX
EC: 4.1.1.-
UniProt: Q9HX08
Ligands: 4LU, SCN, PO4

Structure

x-ray diffraction · resolution 1.61 · 1 distinct chain · 42% helix, 14% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	UbiX (EC 4.1.1.-)	protein	207	42% helix, 14% strand	Q9HX08

Ligands and binding sites

4LU · 1-deoxy-5-O-phosphono-1-(3,3,4,5-tetramethyl-9,11-dioxo-2,3,8,9,10,11-hexahydro-7H-quinolino[1,8-fg]pteridin-12-ium-7-yl)-D-ribitol · ligand · chains A
SCN · Thiocyanate ion · ion · 3 copies · chains A
PO4 · Phosphate ion · ion · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

4ZAX · Structure of ubix in complex with oxidised prenylated FMN (radical) · the same entry in another collection · chain A against A, TM-score 1.00
Q9HX08 · AlphaFold monomer V2.0 prediction for flavin prenyltransferase ubix (Q9HX08) · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9HX08
Elsewhere: RCSB PDB 4ZAX · PDBe 4ZAX · UniProt Q9HX08

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