Research workbench
AlphaFold monomer V2.0 prediction for mitochondrial cardiolipin hydrolase (Q9VKD7)
Analyse AlphaFold monomer V2.0 prediction for mitochondrial cardiolipin hydrolase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9VKD7
- Type
- protein
- Length
- 253 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x1ED4a68B4011314730adE976b56Ad4cA21b54dcD
- Molecule
- Mitochondrial cardiolipin hydrolase
- UniProt
- Q9VKD7
- Pockets
- 2 · best druggability 0.46
Structure
1 distinct chain · 47% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Mitochondrial cardiolipin hydrolase | protein | 253 | 47% helix, 15% strand | Q9VKD7 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 149 | 0.46 | 0.76 | 25 | empty |
| 2 | 123 | 0.39 | 0.74 | 21 | empty |
Compared structures
- 4GEL · Crystal structure of zucchini · an experimental structure of the same protein · chain A against A, TM-score 0.73
- 4GEL · Crystal structure of Zucchini · an experimental structure of the same protein · chain A against A, TM-score 0.73
- 4GEM · Crystal structure of Zucchini (K171A) · an experimental structure of the same protein · chain A against B, TM-score 0.72
- 4GEM · Crystal structure of zucchini (K171A) · an experimental structure of the same protein · chain A against B, TM-score 0.72
- 4GEN · Crystal structure of zucchini (monomer) · an experimental structure of the same protein · chain A against A, TM-score 0.57
- 4GEN · Crystal structure of Zucchini (monomer) · an experimental structure of the same protein · chain A against A, TM-score 0.57
- 4H4A · Crystal structure of the C-terminal domain of drosophila melanogaster zucchini · an experimental structure of the same protein · chain A against A, TM-score 0.56
- 4H4A · Crystal structure of the C-terminal domain of Drosophila melanogaster Zucchini · an experimental structure of the same protein · chain A against A, TM-score 0.56
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9VKD7
- Elsewhere: UniProt Q9VKD7 · AlphaFold DB Q9VKD7
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