MolNFT v1 · #93500 · protein
Crystal structure of the C-terminal domain of drosophila melanogaster zucchini
4H4A · Mitochondrial cardiolipin hydrolase: “Crystal structure of the C-terminal domain of drosophila melanogaster zucchini”. X-ray diffraction, 1 pocket (best druggability 0.38). MolNFT v1 #93500 on GenesisL1: 3D structure, binding sites…
- PDB
- 4H4A
- Type
- protein
- Length
- 151 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Mitochondrial cardiolipin hydrolase
- EC
- 3.1.4.-
- UniProt
- Q9VKD7
- Pockets
- 1 · best druggability 0.38
Structure
x-ray diffraction · 1 distinct chain · 43% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Mitochondrial cardiolipin hydrolase (EC 3.1.4.-) | protein | 151 | 43% helix, 19% strand | Q9VKD7 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 99 | 0.38 | 0.76 | 22 | empty |
Modifications
Observed in the structure: 5 modified (engineered).
Compared structures
- 4H4A · Crystal structure of the C-terminal domain of Drosophila melanogaster Zucchini · the same entry in another collection · chain A against A, TM-score 1.00
- Q9VKD7 · AlphaFold monomer V2.0 prediction for mitochondrial cardiolipin hydrolase (Q9VKD7) · a predicted model of the same protein · chain A against A, TM-score 0.92
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9VKD7
- Elsewhere: RCSB PDB 4H4A · PDBe 4H4A · UniProt Q9VKD7
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