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AlphaFold monomer V2.0 prediction for yeats domain-containing protein 4 (O95619)

Analyse AlphaFold monomer V2.0 prediction for yeats domain-containing protein 4 (O95619) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession
O95619
Type
protein
Length
227 residues
Chains
1
Collection
MolNFT v1 / AlphaFold
Contract
0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner
0x05Dc5F64ec3DDC2CEdF9ba8CD7b6b5056bB42D27
Molecule
Yeats domain-containing protein 4
UniProt
O95619
Pockets
2 · best druggability 0.35

Structure

1 distinct chain · 33% helix, 31% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AYeats domain-containing protein 4protein22733% helix, 31% strandO95619

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
1590.350.7716empty
2540.320.7714empty

Compared structures

  • 8X15 · Structure of nucleosome-bound SRCAP-C in the apo state · an experimental structure of the same protein · chain A against W, TM-score 0.67
  • 8X19 · Structure of nucleosome-bound SRCAP-C in the ADP-BeFx-bound state · an experimental structure of the same protein · chain A against W, TM-score 0.67
  • 8X1C · Structure of nucleosome-bound SRCAP-C in the ADP-bound state · an experimental structure of the same protein · chain A against W, TM-score 0.67
  • 8IJ0 · Crystal structure of GAS41 YEATS domain in complex with H3K9ac peptide · an experimental structure of the same protein · chain A against A, TM-score 0.61
  • 5XTZ · Crystal structure of GAS41 YEATS bound to H3K27ac peptide · an experimental structure of the same protein · chain A against A, TM-score 0.60
  • 5XTZ · Crystal structure of GAS41 yeats bound to H3K27AC peptide · an experimental structure of the same protein · chain A against A, TM-score 0.60
  • 8IIY · Crystal structure of MBP fused GAS41 YEATS domain in complex with H3K14ac peptide · an experimental structure of the same protein · chain A against A, TM-score 0.60

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