Research workbench
AlphaFold monomer V2.0 prediction for vapc ribonuclease AF_1683 (O28590)
Analyse AlphaFold monomer V2.0 prediction for vapc ribonuclease AF_1683 (O28590) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- O28590
- Type
- protein
- Length
- 156 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xBF0D2e107Ce1EcD2C4369B042274201DB719AaAF
- Molecule
- Vapc ribonuclease AF_1683
- UniProt
- O28590
- Pockets
- 2 · best druggability 0.34
Structure
1 distinct chain · 55% helix, 13% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Vapc ribonuclease AF_1683 | protein | 156 | 55% helix, 13% strand | O28590 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 78 | 0.34 | 0.74 | 15 | empty |
| 2 | 99 | 0.33 | 0.73 | 17 | empty |
Compared structures
- 1W8I · The Structure of gene product af1683 from Archaeoglobus fulgidus. · an experimental structure of the same protein · chain A against A, TM-score 0.98
- 1W8I · The structure of gene product AF1683 from archaeoglobus fulgidus. · an experimental structure of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O28590
- Elsewhere: UniProt O28590 · AlphaFold DB O28590
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