MolNFT v1 · #25883 · protein
The structure of gene product AF1683 from archaeoglobus fulgidus.
1W8I · Putative vapc ribonuclease AF_1683: “The structure of gene product AF1683 from archaeoglobus fulgidus.”. X-ray diffraction, 1 pocket (best druggability 0.25). MolNFT v1 #25883 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 1W8I
- Type
- protein
- Length
- 155 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Putative vapc ribonuclease AF_1683
- EC
- 3.1.-.-
- UniProt
- O28590
- Pockets
- 1 · best druggability 0.25
Structure
x-ray diffraction · 1 distinct chain · 53% helix, 11% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative vapc ribonuclease AF_1683 (EC 3.1.-.-) | protein | 155 | 53% helix, 11% strand | O28590 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 63 | 0.25 | 0.72 | 15 | empty |
Modifications
Observed in the structure: 2 modified (engineered).
Compared structures
- 1W8I · The Structure of gene product af1683 from Archaeoglobus fulgidus. · the same entry in another collection · chain A against A, TM-score 1.00
- O28590 · AlphaFold monomer V2.0 prediction for vapc ribonuclease AF_1683 (O28590) · a predicted model of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O28590
- Elsewhere: RCSB PDB 1W8I · PDBe 1W8I · UniProt O28590
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