Research workbench
AlphaFold monomer V2.0 prediction for endo-1,4-beta-xylanase (P09850)
Analyse AlphaFold monomer V2.0 prediction for endo-1,4-beta-xylanase (P09850) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P09850
- Type
- protein
- Length
- 213 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x6BdE6afbf1E5F079b9F4169e9362dC26693b311A
- Molecule
- Endo-1,4-beta-xylanase
- UniProt
- P09850
- Pockets
- 1 · best druggability 0.52
Structure
1 distinct chain · 5% helix, 57% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Endo-1,4-beta-xylanase | protein | 213 | 5% helix, 57% strand | P09850 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 179 | 0.52 | 0.78 | 27 | empty |
Compared structures
- 8QY0 · Xylanase from Bacillus circulans mutant E78Q/Y69A bound to xylotriose · an experimental structure of the same protein · chain A against A, TM-score 0.87
- 8QXY · Xylanase from Bacillus circulans mutant E78Q bound to xylotriose · an experimental structure of the same protein · chain A against A, TM-score 0.87
- 8QXZ · Xylanase from Bacillus circulans mutant E78Q/Y69A · an experimental structure of the same protein · chain A against A, TM-score 0.87
- 3VZO · Crystal structure of the Bacillus circulans endo-beta-(1,4)-xylanase (BcX) N35H mutant… · an experimental structure of the same protein · chain A against A, TM-score 0.87
- 3VZO · Crystal structure of the bacillus circulans endo-beta-(1,4)-xylanase (bcx) N35H mutant… · an experimental structure of the same protein · chain A against A, TM-score 0.87
- 3VZN · Crystal structure of the Bacillus circulans endo-beta-(1,4)-xylanase (BcX) N35E mutant… · an experimental structure of the same protein · chain A against A, TM-score 0.86
- 3VZN · Crystal structure of the bacillus circulans endo-beta-(1,4)-xylanase (bcx) N35E mutant… · an experimental structure of the same protein · chain A against A, TM-score 0.86
- 3VZK · Crystal structure of the Bacillus circulans endo-beta-(1,4)-xylanase (BcX) N35E mutant · an experimental structure of the same protein · chain A against A, TM-score 0.86
- 3VZK · Crystal structure of the bacillus circulans endo-beta-(1,4)-xylanase (bcx) N35E mutant · an experimental structure of the same protein · chain A against A, TM-score 0.86
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P09850
- Elsewhere: UniProt P09850 · AlphaFold DB P09850
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