Research workbench
AlphaFold monomer V2.0 prediction for xylose isomerase (P24299)
Analyse AlphaFold monomer V2.0 prediction for xylose isomerase (P24299) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P24299
- Type
- protein
- Length
- 391 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x6Ed09D80e98fE15DE51C9E7a8896AbF1f2365C3e
- Molecule
- Xylose isomerase
- UniProt
- P24299
- Pockets
- 3 · best druggability 0.67
Structure
1 distinct chain · 49% helix, 11% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Xylose isomerase | protein | 391 | 49% helix, 11% strand | P24299 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 533 | 0.67 | 0.77 | 44 | empty |
| 2 | 71 | 0.42 | 0.81 | 15 | empty |
| 3 | 53 | 0.26 | 0.73 | 10 | empty |
Compared structures
- 6XIA · Refinement of glucose isomerase from streptomyces albus at 1.65 ångströms with data from… · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 6XIA · Refinement of glucose isomerase from streptomyces albus at 1.65 ångströms with data from… · an experimental structure of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P24299
- Elsewhere: UniProt P24299 · AlphaFold DB P24299
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