Research workbench
AlphaFold monomer V2.0 prediction for xyloglucan 6-xylosyltransferase 1 (Q9LZJ3)
Analyse AlphaFold monomer V2.0 prediction for xyloglucan 6-xylosyltransferase 1 (Q9LZJ3) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9LZJ3
- Type
- protein
- Length
- 460 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xbDA05C32aD6eE153C8C5A78dfa48d7Ba25694fea
- Molecule
- Xyloglucan 6-xylosyltransferase 1
- UniProt
- Q9LZJ3
- Pockets
- 2 · best druggability 0.82
Structure
1 distinct chain · 40% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Xyloglucan 6-xylosyltransferase 1 | protein | 460 | 40% helix, 12% strand | Q9LZJ3 |
Pockets
2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 878 | 0.82 | 0.84 | 73 | empty |
| 2 | 636 | 0.62 | 0.73 | 49 | empty |
Modifications
Observed in the structure: 2 disulfide (disulfide).
Compared structures
- 6BSV · Crystal structure of xyloglucan xylosyltransferase binary form · an experimental structure of the same protein · chain A against A, TM-score 0.73
- 6BSV · Crystal structure of Xyloglucan Xylosyltransferase binary form · an experimental structure of the same protein · chain A against A, TM-score 0.73
- 6BSW · Crystal structure of Xyloglucan Xylosyltransferase 1 ternary form · an experimental structure of the same protein · chain A against A, TM-score 0.73
- 6BSW · Crystal structure of xyloglucan xylosyltransferase 1 ternary form · an experimental structure of the same protein · chain A against A, TM-score 0.73
- 6BSU · Crystal structure of xyloglucan xylosyltransferase I · an experimental structure of the same protein · chain A against B, TM-score 0.73
- 6BSU · Crystal structure of xyloglucan xylosyltransferase I · an experimental structure of the same protein · chain A against A, TM-score 0.73
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9LZJ3
- Elsewhere: UniProt Q9LZJ3 · AlphaFold DB Q9LZJ3
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