Research workbench
AlphaFold monomer V2.0 prediction for V-type proton ATPase subunit F (Q28029)
Analyse AlphaFold monomer V2.0 prediction for V-type proton ATPase subunit F (Q28029) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q28029
- Type
- protein
- Length
- 119 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x149591A8f137f962b0F00D67fDF8919Fa48b8be4
- Molecule
- V-type proton ATPase subunit F
- UniProt
- Q28029
- Pockets
- 1 · best druggability 0.34
Structure
1 distinct chain · 33% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | V-type proton ATPase subunit F | protein | 119 | 33% helix, 19% strand | Q28029 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 57 | 0.34 | 0.78 | 13 | empty |
Compared structures
- 6XBW · Cryo-EM structure of V-ATPase from bovine brain, state 1 · an experimental structure of the same protein · chain A against L, TM-score 0.82
- 6XBW · Cryo-EM structure of V-ATPase from bovine brain, state 1 · an experimental structure of the same protein · chain A against L, TM-score 0.82
- 7KHR · Cryo-EM structure of bafilomycin A1-bound intact V-ATPase from bovine brain · an experimental structure of the same protein · chain A against L, TM-score 0.82
- 7KHR · Cryo-EM structure of bafilomycin A1-bound intact V-ATPase from bovine brain · an experimental structure of the same protein · chain A against L, TM-score 0.82
- 6XBY · Cryo-EM structure of V-ATPase from bovine brain, state 2 · an experimental structure of the same protein · chain A against L, TM-score 0.80
- 6XBY · Cryo-EM structure of V-ATPase from bovine brain, state 2 · an experimental structure of the same protein · chain A against L, TM-score 0.80
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q28029
- Elsewhere: UniProt Q28029 · AlphaFold DB Q28029
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