Research workbench
AlphaFold monomer V2.0 prediction for carnitine O-acetyltransferase (P47934)
Analyse AlphaFold monomer V2.0 prediction for carnitine O-acetyltransferase (P47934) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P47934
- Type
- protein
- Length
- 626 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7012c0b45c68a2c067644b9d3e5DDa06892c6957
- Molecule
- Carnitine O-acetyltransferase
- UniProt
- P47934
- Pockets
- 5 · best druggability 0.76
Structure
1 distinct chain · 44% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Carnitine O-acetyltransferase | protein | 626 | 44% helix, 15% strand | P47934 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 807 | 0.76 | 0.80 | 72 | empty |
| 2 | 175 | 0.52 | 0.78 | 25 | empty |
| 3 | 125 | 0.47 | 0.78 | 17 | empty |
| 4 | 74 | 0.46 | 0.82 | 16 | empty |
| 5 | 85 | 0.35 | 0.75 | 19 | empty |
Compared structures
- 1T7Q · Crystal structure of the F565A mutant of murine carnitine acetyltransferase in complex… · an experimental structure of the same protein · chain A against A, TM-score 0.95
- 1T7Q · Crystal structure of the F565A mutant of murine carnitine acetyltransferase in complex… · an experimental structure of the same protein · chain A against A, TM-score 0.95
- 1T7O · Crystal structure of the M564G mutant of murine carnitine acetyltransferase in complex… · an experimental structure of the same protein · chain A against A, TM-score 0.95
- 1T7O · Crystal structure of the M564G mutant of murine carnitine acetyltransferase in complex… · an experimental structure of the same protein · chain A against A, TM-score 0.95
- 1T7N · Crystal structure of the M564G mutant of murine CrAT · an experimental structure of the same protein · chain A against A, TM-score 0.95
- 1T7N · Crystal structure of the M564G mutant of murine crat · an experimental structure of the same protein · chain A against A, TM-score 0.95
- 1NDB · Crystal structure of carnitine acetyltransferase · an experimental structure of the same protein · chain A against A, TM-score 0.95
- 1NDB · Crystal structure of Carnitine Acetyltransferase · an experimental structure of the same protein · chain A against A, TM-score 0.95
- 1NDF · Carnitine Acetyltransferase in Complex with Carnitine · an experimental structure of the same protein · chain A against A, TM-score 0.95
- 1NDF · Carnitine acetyltransferase in complex with carnitine · an experimental structure of the same protein · chain A against A, TM-score 0.95
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P47934
- Elsewhere: UniProt P47934 · AlphaFold DB P47934
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