Research workbench
AlphaFold monomer V2.0 prediction for ubiquitin-conjugating enzyme E2-21 kda (P29340)
Analyse AlphaFold monomer V2.0 prediction for ubiquitin-conjugating enzyme E2-21 kda… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P29340
- Type
- protein
- Length
- 183 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x03eE9dF280950A2b9f9DE96506c6093Adc158ac7
- Molecule
- Ubiquitin-conjugating enzyme E2-21 kda
- UniProt
- P29340
- Pockets
- 3 · best druggability 0.38
Structure
1 distinct chain · 35% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ubiquitin-conjugating enzyme E2-21 kda | protein | 183 | 35% helix, 20% strand | P29340 |
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 76 | 0.38 | 0.77 | 11 | empty |
| 2 | 76 | 0.34 | 0.76 | 17 | empty |
| 3 | 55 | 0.27 | 0.74 | 12 | empty |
Compared structures
- 2Y9M · Pex4p-Pex22p structure · an experimental structure of the same protein · chain A against A, TM-score 0.90
- 2Y9M · PEX4P-PEX22P structure · an experimental structure of the same protein · chain A against A, TM-score 0.90
- 2Y9P · Pex4p-Pex22p mutant II structure · an experimental structure of the same protein · chain A against A, TM-score 0.90
- 2Y9P · PEX4P-PEX22P mutant II structure · an experimental structure of the same protein · chain A against A, TM-score 0.90
- 4BWF · Pex4p-Pex22p disulphide bond mutant · an experimental structure of the same protein · chain A against A, TM-score 0.90
- 4BWF · PEX4P-PEX22P disulphide bond mutant · an experimental structure of the same protein · chain A against A, TM-score 0.90
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P29340
- Elsewhere: UniProt P29340 · AlphaFold DB P29340
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