Research workbench
AlphaFold monomer V2.0 prediction for ubiquitin-conjugating enzyme E2 R1 (P49427)
Analyse AlphaFold monomer V2.0 prediction for ubiquitin-conjugating enzyme E2 R1… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P49427
- Type
- protein
- Length
- 236 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xD6c8c70034505E2afFB97C831d798cF5AA67e537
- Molecule
- Ubiquitin-conjugating enzyme E2 R1
- UniProt
- P49427
- Pockets
- 1 · best druggability 0.41
Structure
1 distinct chain · 29% helix, 11% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ubiquitin-conjugating enzyme E2 R1 | protein | 236 | 29% helix, 11% strand | P49427 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 97 | 0.41 | 0.77 | 19 | empty |
Compared structures
- 7M2K · CDC34A-Ubiquitin-2ab inhibitor complex · an experimental structure of the same protein · chain A against A, TM-score 0.70
- 7M2K · CDC34A-ubiquitin-2AB inhibitor complex · an experimental structure of the same protein · chain A against A, TM-score 0.70
- 4MDK · CDC34-ubiquitin-CC0651 complex · an experimental structure of the same protein · chain A against A, TM-score 0.69
- 4MDK · Cdc34-ubiquitin-CC0651 complex · an experimental structure of the same protein · chain A against A, TM-score 0.69
- 3RZ3 · Human CDC34 E2 in complex with CC0651 inhibitor · an experimental structure of the same protein · chain A against A, TM-score 0.67
- 3RZ3 · Human Cdc34 E2 in complex with CC0651 inhibitor · an experimental structure of the same protein · chain A against A, TM-score 0.67
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P49427
- Elsewhere: UniProt P49427 · AlphaFold DB P49427
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