Research workbench
AlphaFold monomer V2.0 prediction for T cell receptor beta variable 28 (A0A5B6)
Analyse AlphaFold monomer V2.0 prediction for T cell receptor beta variable 28 (A0A5B6) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A0A5B6
- Type
- protein
- Length
- 114 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7d626243aF5Ca6d5eB0779378463DcADA09F69c7
- Molecule
- T cell receptor beta variable 28
- UniProt
- A0A5B6
- Pockets
- 1 · best druggability 0.52
Structure
1 distinct chain · 12% helix, 45% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | T cell receptor beta variable 28 | protein | 114 | 12% helix, 45% strand | A0A5B6 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 156 | 0.52 | 0.79 | 23 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
- 6AVF · Crystal structure of the KFJ5 TCR-ny-eso-1-HLA-B*07:02 complex · an experimental structure of the same protein · chain A against B, TM-score 0.81
- 6AVF · Crystal structure of the KFJ5 TCR-NY-ESO-1-HLA-B*07:02 complex · an experimental structure of the same protein · chain A against B, TM-score 0.81
- 6AT6 · Crystal structure of the KFJ5 TCR · an experimental structure of the same protein · chain A against B, TM-score 0.80
- 6AT6 · Crystal structure of the KFJ5 TCR · an experimental structure of the same protein · chain A against B, TM-score 0.80
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A5B6
- Elsewhere: UniProt A0A5B6 · AlphaFold DB A0A5B6
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