Research workbench
AlphaFold monomer V2.0 prediction for tyrosine phenol-lyase (P31013)
Analyse AlphaFold monomer V2.0 prediction for tyrosine phenol-lyase (P31013) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P31013
- Type
- protein
- Length
- 456 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x727D03690E0ac68C9a3242921fC850514E2AA0C1
- Molecule
- Tyrosine phenol-lyase
- UniProt
- P31013
- Pockets
- 6 · best druggability 0.73
Structure
1 distinct chain · 44% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Tyrosine phenol-lyase | protein | 456 | 44% helix, 15% strand | P31013 |
Pockets
6 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 193 | 0.73 | 0.90 | 40 | empty |
| 2 | 295 | 0.55 | 0.76 | 35 | empty |
| 3 | 98 | 0.51 | 0.82 | 21 | empty |
| 4 | 60 | 0.31 | 0.75 | 15 | empty |
| 5 | 55 | 0.28 | 0.74 | 16 | empty |
Compared structures
- 2YCP · F448H mutant of tyrosine phenol-lyase from Citrobacter freundii in complex with quinonoid… · an experimental structure of the same protein · chain A against A, TM-score 1.00
- 2YCP · F448H mutant of tyrosine phenol-lyase from citrobacter freundii in complex with quinonoid… · an experimental structure of the same protein · chain A against A, TM-score 1.00
- 7TCS · M379A mutant tyrosine phenol-lyase complexed with L-methionine · an experimental structure of the same protein · chain A against A, TM-score 1.00
- 2VLF · Quinonoid intermediate of citrobacter freundii tyrosine phenol-lyase formed with alanine · an experimental structure of the same protein · chain A against A, TM-score 1.00
- 2VLF · Quinonoid intermediate of Citrobacter freundii tyrosine phenol-lyase formed with alanine · an experimental structure of the same protein · chain A against A, TM-score 1.00
- 2YCN · Y71F mutant of tyrosine phenol-lyase from citrobacter freundii in complex with quinonoid… · an experimental structure of the same protein · chain A against A, TM-score 1.00
- 2YCN · Y71F mutant of tyrosine phenol-lyase from Citrobacter freundii in complex with quinonoid… · an experimental structure of the same protein · chain A against A, TM-score 1.00
- 2VLH · Quinonoid intermediate of Citrobacter freundii tyrosine phenol-lyase formed with… · an experimental structure of the same protein · chain A against A, TM-score 1.00
- 2VLH · Quinonoid intermediate of citrobacter freundii tyrosine phenol-lyase formed with… · an experimental structure of the same protein · chain A against A, TM-score 1.00
- 2EZ2 · Apo tyrosine phenol-lyase from citrobacter freundii at pH 8.0 · an experimental structure of the same protein · chain A against A, TM-score 1.00
- 2EZ2 · Apo tyrosine phenol-lyase from Citrobacter freundii at pH 8.0 · an experimental structure of the same protein · chain A against A, TM-score 1.00
- 2YCT · Tyrosine phenol-lyase from Citrobacter freundii in complex with pyridine N-oxide and the… · an experimental structure of the same protein · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P31013
- Elsewhere: UniProt P31013 · AlphaFold DB P31013
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