Research workbench
AlphaFold monomer V2.0 prediction for triosephosphate isomerase, glycosomal (P04789)
Analyse AlphaFold monomer V2.0 prediction for triosephosphate isomerase, glycosomal… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P04789
- Type
- protein
- Length
- 250 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x52eed1164b71286E6413de11A2358780D6d90f8B
- Molecule
- Triosephosphate isomerase, glycosomal
- UniProt
- P04789
- Pockets
- 1 · best druggability 0.40
Structure
1 distinct chain · 46% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Triosephosphate isomerase, glycosomal | protein | 250 | 46% helix, 17% strand | P04789 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 85 | 0.40 | 0.78 | 17 | empty |
Compared structures
- 5I3K · Structure-Function Studies on Role of Hydrophobic Clamping of a Basic Glutamate in… · an experimental structure of the same protein · chain A against B, TM-score 0.99
- 1KV5 · Structure of trypanosoma brucei brucei tim with the salt-bridge- forming residue ARG191… · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 1KV5 · Structure of Trypanosoma brucei brucei TIM with the salt-bridge-forming residue Arg191… · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 5I3I · Structure-Function Studies on Role of Hydrophobic Clamping of a Basic Glutamate in… · an experimental structure of the same protein · chain A against C, TM-score 0.99
- 2V2C · The A178L mutation in the C-terminal hinge of the flexible loop-6 of triosephosphate… · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 2V2C · The A178L mutation in the C-terminal hinge of the flexible loop-6 of triosephosphate… · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 5TIM · Refined 1.83 ångströms structure of trypanosomal triosephosphate isomerase, crystallized… · an experimental structure of the same protein · chain A against B, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P04789
- Elsewhere: UniProt P04789 · AlphaFold DB P04789
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