Research workbench
AlphaFold monomer V2.0 prediction for tyrosine--tRNA ligase (P00952)
Analyse AlphaFold monomer V2.0 prediction for tyrosine--tRNA ligase (P00952) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P00952
- Type
- protein
- Length
- 419 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xEA023C66b29A57D0c10ab559620011c8b4d0C9bF
- Molecule
- Tyrosine--tRNA ligase
- UniProt
- P00952
- Pockets
- 3 · best druggability 0.76
Structure
1 distinct chain · 51% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Tyrosine--tRNA ligase | protein | 419 | 51% helix, 16% strand | P00952 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 436 | 0.76 | 0.85 | 49 | empty |
| 2 | 83 | 0.35 | 0.74 | 16 | empty |
| 3 | 92 | 0.33 | 0.74 | 19 | empty |
Compared structures
- 4TS1 · Crystal structure of a deletion mutant of a tyrosyl-T/RNA synthetase complexed with… · an experimental structure of the same protein · chain A against A, TM-score 0.75
- 4TS1 · Crystal structure of a deletion mutant of a tyrosyl-T/RNA synthetase complexed with… · an experimental structure of the same protein · chain A against A, TM-score 0.75
- 3TS1 · Structure of tyrosyl-T/RNA synthetase refined at 2.3 ångströms resolution. interaction of… · an experimental structure of the same protein · chain A against A, TM-score 0.75
- 3TS1 · Structure of tyrosyl-T/RNA synthetase refined at 2.3 ångströms resolution. interaction of… · an experimental structure of the same protein · chain A against A, TM-score 0.75
- 1TYA · Structural analysis of a series of mutants of tyrosyl-tRNA synthetase: enhancement of… · an experimental structure of the same protein · chain A against E, TM-score 0.75
- 1TYA · Structural analysis of a series of mutants of tyrosyl-tRNA synthetase: enhancement of… · an experimental structure of the same protein · chain A against E, TM-score 0.75
- 1TYD · Structure of tyrosyl-tRNA synthetase refined at 2.3 ångströms resolution. interaction of… · an experimental structure of the same protein · chain A against E, TM-score 0.75
- 1TYD · Structure of tyrosyl-tRNA synthetase refined at 2.3 ångströms resolution. interaction of… · an experimental structure of the same protein · chain A against E, TM-score 0.75
- 1TYC · Structural analysis of a series of mutants of tyrosyl-tRNA synthetase: enhancement of… · an experimental structure of the same protein · chain A against A, TM-score 0.75
- 1TYC · Structural analysis of a series of mutants of tyrosyl-tRNA synthetase: enhancement of… · an experimental structure of the same protein · chain A against A, TM-score 0.75
- 2TS1 · Structure of tyrosyl-T/RNA synthetase refined at 2.3 ångströms resolution. interaction of… · an experimental structure of the same protein · chain A against A, TM-score 0.75
- 2TS1 · Structure of tyrosyl-T/RNA synthetase refined at 2.3 ångströms resolution. interaction of… · an experimental structure of the same protein · chain A against A, TM-score 0.75
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P00952
- Elsewhere: UniProt P00952 · AlphaFold DB P00952
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.