Research workbench
AlphaFold monomer V2.0 prediction for cst complex subunit STN1 (Q9H668)
Analyse AlphaFold monomer V2.0 prediction for cst complex subunit STN1 (Q9H668) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9H668
- Type
- protein
- Length
- 368 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5881B09f2D8e743400698633641fc1cD2Ed2BE6F
- Molecule
- Cst complex subunit STN1
- UniProt
- Q9H668
- Pockets
- 3 · best druggability 0.44
Structure
1 distinct chain · 44% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Cst complex subunit STN1 | protein | 368 | 44% helix, 21% strand | Q9H668 |
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 70 | 0.44 | 0.81 | 15 | empty |
| 2 | 101 | 0.36 | 0.74 | 16 | empty |
| 3 | 70 | 0.31 | 0.75 | 15 | empty |
Compared structures
- 8D0B · Human cst-DNA polymerase ALPHA/PRIMASE preinitiation complex bound to 4XTEL-foldback… · an experimental structure of the same protein · chain A against B, TM-score 0.56
- 8D0B · Human CST-DNA polymerase alpha/primase preinitiation complex bound to 4xTEL-foldback… · an experimental structure of the same protein · chain A against B, TM-score 0.56
- 8D0K · Human CST-DNA polymerase alpha/primase preinitiation complex bound to 4xTEL-foldback… · an experimental structure of the same protein · chain A against B, TM-score 0.55
- 8D0K · Human cst-DNA polymerase ALPHA/PRIMASE preinitiation complex bound to 4XTEL-foldback… · an experimental structure of the same protein · chain A against B, TM-score 0.55
- 8SOJ · Cryo-EM structure of human CST bound to POT1(ESDL)/TPP1 in the absence of telomeric ssDNA · an experimental structure of the same protein · chain A against B, TM-score 0.47
- 8SOK · Cryo-EM structure of human CST bound to POT1(ESDL)/TPP1 in the presence of telomeric ssDNA · an experimental structure of the same protein · chain A against B, TM-score 0.47
- 4JQF · Structure of the C-terminal domain of human telomeric Stn1 · an experimental structure of the same protein · chain A against A, TM-score 0.45
- 4JQF · Structure of the C-terminal domain of human telomeric STN1 · an experimental structure of the same protein · chain A against A, TM-score 0.45
- 6W6W · Cryo-EM structure of CST bound to telomeric single-stranded DNA · an experimental structure of the same protein · chain A against C, TM-score 0.43
- 6W6W · Cryo-EM structure of cst bound to telomeric single-stranded DNA · an experimental structure of the same protein · chain A against C, TM-score 0.43
- 7U5C · Cryo-EM structure of human cst bound to DNA polymerase alpha-primase in a recruitment… · an experimental structure of the same protein · chain A against F, TM-score 0.38
- 7U5C · Cryo-EM structure of human CST bound to DNA polymerase alpha-primase in a recruitment… · an experimental structure of the same protein · chain A against F, TM-score 0.38
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9H668
- Elsewhere: UniProt Q9H668 · AlphaFold DB Q9H668
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