Research workbench
AlphaFold monomer V2.0 prediction for star-related lipid transfer protein 3 (Q14849)
Analyse AlphaFold monomer V2.0 prediction for star-related lipid transfer protein 3… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q14849
- Type
- protein
- Length
- 445 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xc0F878C3f3E2a1874e2A6daC80d429e553DdB0D5
- Molecule
- Star-related lipid transfer protein 3
- UniProt
- Q14849
- Pockets
- 3 · best druggability 0.82
Structure
1 distinct chain · 43% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Star-related lipid transfer protein 3 | protein | 445 | 43% helix, 18% strand | Q14849 |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 243 | 0.82 | 0.95 | 41 | empty |
| 2 | 294 | 0.55 | 0.76 | 32 | empty |
| 3 | 154 | 0.41 | 0.74 | 15 | empty |
Compared structures
- 1EM2 · Star-related lipid transport domain of MLN64 · an experimental structure of the same protein · chain A against A, TM-score 0.48
- 1EM2 · Star-related lipid transport domain of MLN64 · an experimental structure of the same protein · chain A against A, TM-score 0.48
- 5I9J · Structure of the cholesterol and lutein-binding domain of human STARD3 at 1.74A · an experimental structure of the same protein · chain A against A, TM-score 0.48
- 5I9J · Structure of the cholesterol and lutein-binding domain of human STARD3 at 1.74A · an experimental structure of the same protein · chain A against A, TM-score 0.48
- 6TQU · The crystal structure of the MSP domain of human MOSPD2 in complex with the Phospho-FFAT… · an experimental structure of the same protein · chain A against D, TM-score 0.02
- 6TQU · The crystal structure of the msp domain of human MOSPD2 in complex with the phospho-ffat… · an experimental structure of the same protein · chain A against D, TM-score 0.02
- 6TQR · The crystal structure of the MSP domain of human VAP-A in complex with the Phospho-FFAT… · an experimental structure of the same protein · chain A against E, TM-score 0.02
- 6TQR · The crystal structure of the msp domain of human vap-a in complex with the phospho-ffat… · an experimental structure of the same protein · chain A against E, TM-score 0.02
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q14849
- Elsewhere: UniProt Q14849 · AlphaFold DB Q14849
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