Research workbench
AlphaFold monomer V2.0 prediction for serrate RNA effector molecule homolog (Q9BXP5)
Analyse AlphaFold monomer V2.0 prediction for serrate RNA effector molecule homolog… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9BXP5
- Type
- protein
- Length
- 876 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x0E31920A67aafd5e006BeA2a197680e7C7330186
- Molecule
- Serrate RNA effector molecule homolog
- UniProt
- Q9BXP5
- Pockets
- 6 · best druggability 0.70
Structure
1 distinct chain · 27% helix, 6% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Serrate RNA effector molecule homolog | protein | 876 | 27% helix, 6% strand | Q9BXP5 |
Pockets
6 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 829 | 0.70 | 0.76 | 52 | empty |
| 2 | 293 | 0.52 | 0.74 | 35 | empty |
| 3 | 151 | 0.47 | 0.77 | 21 | empty |
| 4 | 153 | 0.45 | 0.76 | 25 | empty |
| 5 | 118 | 0.37 | 0.73 | 20 | empty |
Compared structures
- 6F7J · Crystal structure of human ARS2 residues 171-270 + 408-763 · an experimental structure of the same protein · chain A against B, TM-score 0.36
- 6F7J · Crystal structure of Human ARS2 residues 171-270 + 408-763 · an experimental structure of the same protein · chain A against B, TM-score 0.36
- 6F7S · Crystal structure of human ARS2 residues 147-270 + 408-763 with deletion of loop B · an experimental structure of the same protein · chain A against C, TM-score 0.36
- 6F7S · Crystal structure of Human ARS2 residues 147-270 + 408-763 with deletion of loop B · an experimental structure of the same protein · chain A against C, TM-score 0.36
- 6F7P · Crystal structure of human ARS2 residues 147-270 + 408-763 · an experimental structure of the same protein · chain A against D, TM-score 0.36
- 6F7P · Crystal structure of Human ARS2 residues 147-270 + 408-763 · an experimental structure of the same protein · chain A against D, TM-score 0.36
- 6F8D · Crystal structure of human ARS2 residues 171-270 + 408-763 (P65 form) · an experimental structure of the same protein · chain A against C, TM-score 0.34
- 6F8D · Crystal structure of Human ARS2 residues 171-270 + 408-763 (P65 form) · an experimental structure of the same protein · chain A against C, TM-score 0.34
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9BXP5
- Elsewhere: UniProt Q9BXP5 · AlphaFold DB Q9BXP5
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