Research workbench
AlphaFold monomer V2.0 prediction for cell wall assembly regulator SMI1 (P32566)
Analyse AlphaFold monomer V2.0 prediction for cell wall assembly regulator SMI1 (P32566) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P32566
- Type
- protein
- Length
- 505 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xCFEF5094C7d4AaC7B084812EDD655bb8402d4835
- Molecule
- Cell wall assembly regulator SMI1
- UniProt
- P32566
- Pockets
- 6 · best druggability 0.59
Structure
1 distinct chain · 30% helix, 9% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Cell wall assembly regulator SMI1 | protein | 505 | 30% helix, 9% strand | P32566 |
Pockets
6 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 408 | 0.59 | 0.75 | 44 | empty |
| 2 | 307 | 0.53 | 0.75 | 39 | empty |
| 3 | 50 | 0.37 | 0.80 | 15 | empty |
| 4 | 94 | 0.37 | 0.76 | 19 | empty |
| 5 | 50 | 0.30 | 0.76 | 16 | empty |
Compared structures
- 6QBR · structure of the core domaine of Knr4, an intrinsically disordered protein from… · an experimental structure of the same protein · chain A against B, TM-score 0.45
- 6QBR · Structure of the core domaine of KNR4, an intrinsically disordered protein from… · an experimental structure of the same protein · chain A against B, TM-score 0.45
- 6QBQ · Structure of the core domaine of KNR4, an intrinsically disordered protein from… · an experimental structure of the same protein · chain A against B, TM-score 0.44
- 6QBQ · structure of the core domaine of Knr4, an intrinsically disordered protein from… · an experimental structure of the same protein · chain A against B, TM-score 0.44
- 6QBO · Structure of the core domaine of KNR4, an intrinsically disordered protein from… · an experimental structure of the same protein · chain A against A, TM-score 0.43
- 6QBO · structure of the core domaine of Knr4, an intrinsically disordered protein from… · an experimental structure of the same protein · chain A against A, TM-score 0.43
- 5J1B · Structure of the core domaine of KNR4, an intrinsically disordered protein from… · an experimental structure of the same protein · chain A against A, TM-score 0.43
- 5J1B · structure of the core domaine of Knr4, an intrinsically disordered protein from… · an experimental structure of the same protein · chain A against A, TM-score 0.43
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P32566
- Elsewhere: UniProt P32566 · AlphaFold DB P32566
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.