Research workbench
AlphaFold monomer V2.0 prediction for structure-specific endonuclease subunit SLX1 (Q6FML9)
Analyse AlphaFold monomer V2.0 prediction for structure-specific endonuclease subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q6FML9
- Type
- protein
- Length
- 312 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x47E832BB26b49F1eEbE3dD4A804024b1195017F7
- Molecule
- Structure-specific endonuclease subunit SLX1
- UniProt
- Q6FML9
- Pockets
- 5 · best druggability 0.58
Structure
1 distinct chain · 40% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Structure-specific endonuclease subunit SLX1 | protein | 312 | 40% helix, 15% strand | Q6FML9 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 252 | 0.58 | 0.79 | 40 | empty |
| 2 | 189 | 0.51 | 0.77 | 26 | empty |
| 3 | 147 | 0.42 | 0.74 | 24 | empty |
| 4 | 127 | 0.42 | 0.76 | 19 | empty |
| 5 | 85 | 0.40 | 0.78 | 15 | empty |
Compared structures
- 4XLG · C. glabrata Slx1 in complex with Slx4CCD. · an experimental structure of the same protein · chain A against A, TM-score 0.82
- 4XLG · C. glabrata SLX1 in complex with SLX4CCD. · an experimental structure of the same protein · chain A against A, TM-score 0.82
- 4XM5 · C. glabrata Slx1. · an experimental structure of the same protein · chain A against A, TM-score 0.82
- 4XM5 · C. glabrata SLX1. · an experimental structure of the same protein · chain A against A, TM-score 0.82
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6FML9
- Elsewhere: UniProt Q6FML9 · AlphaFold DB Q6FML9
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.