MolNFT v1 · #110090 · protein

C. glabrata SLX1.

4XM5 · Structure-specific endonuclease subunit SLX1: “C. glabrata SLX1.”. X-ray diffraction, 2 ligands (ZN, CL), 1 pocket (best druggability 0.55). MolNFT v1 #110090 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 4XM5
Type: protein
Length: 267 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Structure-specific endonuclease subunit SLX1
EC: 3.1.-.-
UniProt: Q6FML9
Ligands: ZN, CL
Pockets: 1 · best druggability 0.55

Structure

x-ray diffraction · 1 distinct chain · 43% helix, 20% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Structure-specific endonuclease subunit SLX1 (EC 3.1.-.-)	protein	267	43% helix, 20% strand	Q6FML9

Ligands and binding sites

ZN · Zinc ion · metal · 2 copies · chains A
CL · Chloride ion · ion · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	220	0.55	0.78	40	empty

Compared structures

4XM5 · C. glabrata Slx1. · the same entry in another collection · chain A against A, TM-score 1.00
Q6FML9 · AlphaFold monomer V2.0 prediction for structure-specific endonuclease subunit SLX1… · a predicted model of the same protein · chain A against A, TM-score 0.95

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q6FML9
Elsewhere: RCSB PDB 4XM5 · PDBe 4XM5 · UniProt Q6FML9

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