Research workbench
AlphaFold monomer V2.0 prediction for spermidine hydroxycinnamoyl transferase (O64470)
Analyse AlphaFold monomer V2.0 prediction for spermidine hydroxycinnamoyl transferase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- O64470
- Type
- protein
- Length
- 451 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xfD2aa30896c43ba48ACc736586610789048c2c7a
- Molecule
- Spermidine hydroxycinnamoyl transferase
- UniProt
- O64470
- Pockets
- 4 · best druggability 0.81
Structure
1 distinct chain · 31% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Spermidine hydroxycinnamoyl transferase | protein | 451 | 31% helix, 25% strand | O64470 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 762 | 0.81 | 0.84 | 75 | empty |
| 2 | 104 | 0.52 | 0.83 | 14 | empty |
| 3 | 120 | 0.41 | 0.76 | 26 | empty |
| 4 | 84 | 0.40 | 0.78 | 17 | empty |
Compared structures
- 6LPV · Structure of spermidine hydroxycinnamoyl transferases from arabidopsis thaliana · an experimental structure of the same protein · chain A against A, TM-score 0.94
- 6LPV · structure of Spermidine hydroxycinnamoyl transferases from Arabidopsis thaliana · an experimental structure of the same protein · chain A against A, TM-score 0.94
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O64470
- Elsewhere: UniProt O64470 · AlphaFold DB O64470
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