Research workbench

AlphaFold monomer V2.0 prediction for translocation protein SEC62 (Q99442)

Analyse AlphaFold monomer V2.0 prediction for translocation protein SEC62 (Q99442) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: Q99442
Type: protein
Length: 399 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x4d07E6a23DeB6B95bd9b90EcB67368b7e8D3B77e
Molecule: Translocation protein SEC62
UniProt: Q99442
Pockets: 1 · best druggability 0.44

Structure

1 distinct chain · 32% helix, 10% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Translocation protein SEC62	protein	399	32% helix, 10% strand	Q99442

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	215	0.44	0.73	24	empty

Compared structures

7BRT · Crystal structure of SEC62 lir fused to gabarap · an experimental structure of the same protein · chain A against A, TM-score 0.15
7BRT · Crystal structure of Sec62 LIR fused to GABARAP · an experimental structure of the same protein · chain A against A, TM-score 0.15

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q99442
Elsewhere: UniProt Q99442 · AlphaFold DB Q99442

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