Research workbench
AlphaFold monomer V2.0 prediction for segregation and condensation protein a (P35154)
Analyse AlphaFold monomer V2.0 prediction for segregation and condensation protein a… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P35154
- Type
- protein
- Length
- 251 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9083d02dD1150e409871618C7e012e864fA13fe4
- Molecule
- Segregation and condensation protein a
- UniProt
- P35154
- Pockets
- 2 · best druggability 0.41
Structure
1 distinct chain · 54% helix, 6% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Segregation and condensation protein a | protein | 251 | 54% helix, 6% strand | P35154 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 64 | 0.41 | 0.80 | 12 | empty |
| 2 | 53 | 0.27 | 0.74 | 13 | empty |
Compared structures
- 5H67 · Crystal structure of the bacillus subtilis smc head domain complexed with the cognate… · an experimental structure of the same protein · chain A against C, TM-score 0.24
- 5H67 · Crystal structure of the Bacillus subtilis SMC head domain complexed with the cognate… · an experimental structure of the same protein · chain A against C, TM-score 0.24
- 5H66 · Crystal structure of the bacillus subtilis smc head domain complexed with the cognate… · an experimental structure of the same protein · chain A against C, TM-score 0.24
- 5H66 · Crystal structure of the Bacillus subtilis SMC head domain complexed with the cognate… · an experimental structure of the same protein · chain A against C, TM-score 0.24
- 3ZGX · Crystal structure of the kleisin-N smc interface in prokaryotic condensin · an experimental structure of the same protein · chain A against C, TM-score 0.23
- 3ZGX · Crystal structure of the kleisin-N SMC interface in prokaryotic condensin · an experimental structure of the same protein · chain A against C, TM-score 0.23
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P35154
- Elsewhere: UniProt P35154 · AlphaFold DB P35154
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