Research workbench

AlphaFold monomer V2.0 prediction for scarecrow-like protein 7 (Q53K16)

Analyse AlphaFold monomer V2.0 prediction for scarecrow-like protein 7 (Q53K16) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: Q53K16
Type: protein
Length: 578 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0xb4D2d9c96b0D792d0b77e7147D724cc1F801ae58
Molecule: Scarecrow-like protein 7
UniProt: Q53K16
Pockets: 6 · best druggability 0.68

Structure

1 distinct chain · 42% helix, 10% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Scarecrow-like protein 7	protein	578	42% helix, 10% strand	Q53K16

Pockets

6 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	363	0.68	0.81	36	empty
2	334	0.59	0.76	32	empty
3	209	0.49	0.76	30	empty
4	136	0.45	0.76	21	empty
5	114	0.41	0.76	23	empty

Compared structures

5HYZ · Crystal structure of SCL7 in oryza sativa · an experimental structure of the same protein · chain A against A, TM-score 0.62
5HYZ · Crystal Structure of SCL7 in Oryza sativa · an experimental structure of the same protein · chain A against A, TM-score 0.62

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q53K16
Elsewhere: UniProt Q53K16 · AlphaFold DB Q53K16

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