Research workbench
AlphaFold monomer V2.0 prediction for intron-encoded endonuclease I-scei (P03882)
Analyse AlphaFold monomer V2.0 prediction for intron-encoded endonuclease I-scei… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P03882
- Type
- protein
- Length
- 235 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9F2924E1D2C3ba0367A5dD34e521d327788cCc9F
- Molecule
- Intron-encoded endonuclease I-scei
- UniProt
- P03882
- Pockets
- 1 · best druggability 0.39
Structure
1 distinct chain · 40% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Intron-encoded endonuclease I-scei | protein | 235 | 40% helix, 20% strand | P03882 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 128 | 0.39 | 0.74 | 23 | empty |
Compared structures
- 5A0M · The crystal structure of I-scei in complex with its target DNA in the presence of mn · an experimental structure of the same protein · chain A against B, TM-score 0.96
- 5A0M · The crystal structure of I-scei in complex with its target DNA in the presence of mn · an experimental structure of the same protein · chain A against B, TM-score 0.96
- 1R7M · The homing endonuclease I-SceI bound to its DNA recognition region · an experimental structure of the same protein · chain A against A, TM-score 0.94
- 1R7M · The homing endonuclease I-scei bound to its DNA recognition region · an experimental structure of the same protein · chain A against A, TM-score 0.94
- 3OOR · I-SceI mutant (K86R/G100T)complexed with C/G+4 DNA substrate · an experimental structure of the same protein · chain A against A, TM-score 0.94
- 3OOR · I-scei mutant (K86R/G100T)COMPLEXED with C/G+4 DNA substrate · an experimental structure of the same protein · chain A against A, TM-score 0.94
- 3OOL · I-SceI complexed with C/G+4 DNA substrate · an experimental structure of the same protein · chain A against A, TM-score 0.94
- 3OOL · I-scei complexed with C/G+4 DNA substrate · an experimental structure of the same protein · chain A against A, TM-score 0.94
- 3C0W · I-SceI in complex with a bottom nicked DNA substrate · an experimental structure of the same protein · chain A against A, TM-score 0.93
- 3C0W · I-scei in complex with a bottom nicked DNA substrate · an experimental structure of the same protein · chain A against A, TM-score 0.93
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P03882
- Elsewhere: UniProt P03882 · AlphaFold DB P03882
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.