AlphaFold monomer V2.0 prediction for streptavidin (P22629)

Structure

1 distinct chain · 17% helix, 37% strand (DSSP).

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Compared structures

• 8TY0 · Streptavidin variant S112E-K121H bound to bis-biotinylated Iron-porphyrin · an experimental structure of the same protein · chain A against D, TM-score 0.68
• 8QQ3 · Streptavidin with a Ni-cofactor · an experimental structure of the same protein · chain A against B, TM-score 0.68
• 6T1E · Streptavidin variants harbouring an artificial organocatalyst based cofactor · an experimental structure of the same protein · chain A against A, TM-score 0.68
• 6S50 · scdSav(SARK)mv2 - Engineering Single-Chain Dimeric Streptavidin as Host for Artificial… · an experimental structure of the same protein · chain A against A, TM-score 0.68
• 7ZX9 · Streptavidin with a fluorescent substrate · an experimental structure of the same protein · chain A against A, TM-score 0.67
• 8AQD · Hydrophobic probe bound to Streptavidin - 1 · an experimental structure of the same protein · chain A against A, TM-score 0.67
• 6FH8 · E. coli surface display of streptavidin for directed evolution of an allylic deallocase · an experimental structure of the same protein · chain A against A, TM-score 0.67
• 6UIY · Artificial Iron Proteins: Modelling the Active Sites in Non-Heme Dioxygenases · an experimental structure of the same protein · chain A against A, TM-score 0.67

Analyse

• Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
• Every structure of UniProt P22629
• Elsewhere: UniProt P22629 · AlphaFold DB P22629