Research workbench
AlphaFold monomer V2.0 prediction for adenosylhomocysteinase (Q9I685)
Analyse AlphaFold monomer V2.0 prediction for adenosylhomocysteinase (Q9I685) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9I685
- Type
- protein
- Length
- 469 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x159a74F8323b2EB2cC088ac2b0e2E49Cd847Cacd
- Molecule
- Adenosylhomocysteinase
- UniProt
- Q9I685
- Pockets
- 4 · best druggability 0.72
Structure
1 distinct chain · 46% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Adenosylhomocysteinase | protein | 469 | 46% helix, 15% strand | Q9I685 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 392 | 0.72 | 0.83 | 58 | empty |
| 2 | 180 | 0.47 | 0.75 | 25 | empty |
| 3 | 104 | 0.43 | 0.78 | 15 | empty |
| 4 | 51 | 0.25 | 0.73 | 15 | empty |
Compared structures
- 8CFU · Crystal structure of S-adenosyl-L-homocysteine hydrolase from P. aeruginosa in complex… · an experimental structure of the same protein · chain A against A, TM-score 0.98
- 8AJW · Crystal structure of the Q65N mutant of S-adenosyl-L-homocysteine hydrolase from… · an experimental structure of the same protein · chain A against BBB, TM-score 0.98
- 8CFS · Crystal structure of S-adenosyl-L-homocysteine hydrolase from P. aeruginosa in complex… · an experimental structure of the same protein · chain A against A, TM-score 0.98
- 8CFZ · Crystal structure of S-adenosyl-L-homocysteine hydrolase from P. aeruginosa in complex… · an experimental structure of the same protein · chain A against A, TM-score 0.98
- 8CFY · Crystal structure of S-adenosyl-L-homocysteine hydrolase from P. aeruginosa in complex… · an experimental structure of the same protein · chain A against D, TM-score 0.98
- 8CG1 · Crystal structure of S-adenosyl-L-homocysteine hydrolase from P. aeruginosa in complex… · an experimental structure of the same protein · chain A against D, TM-score 0.98
- 8CFX · Crystal structure of S-adenosyl-L-homocysteine hydrolase from P. aeruginosa in complex… · an experimental structure of the same protein · chain A against D, TM-score 0.98
- 8CFQ · Crystal structure of S-adenosyl-L-homocysteine hydrolase from P. aeruginosa in complex… · an experimental structure of the same protein · chain A against C, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9I685
- Elsewhere: UniProt Q9I685 · AlphaFold DB Q9I685
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