Research workbench

AlphaFold monomer V2.0 prediction for prestin (Q9JKQ2)

Analyse AlphaFold monomer V2.0 prediction for prestin (Q9JKQ2) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: Q9JKQ2
Type: protein
Length: 744 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x9823334B175F9f2683922fd5F25c4D9e96Fd15E9
Molecule: Prestin
UniProt: Q9JKQ2
Pockets: 9 · best druggability 0.75

Structure

1 distinct chain · 60% helix, 5% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Prestin	protein	744	60% helix, 5% strand	Q9JKQ2

Pockets

9 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	162	0.75	0.92	40	empty
2	501	0.72	0.81	49	empty
3	322	0.59	0.77	34	empty
4	348	0.58	0.76	40	empty
5	109	0.41	0.76	21	empty

Compared structures

7SUN · Atomic model of prestin from gerbil (Meriones unguiculatus) · an experimental structure of the same protein · chain A against B, TM-score 0.83
7SUN · Atomic model of prestin from gerbil (meriones unguiculatus) · an experimental structure of the same protein · chain A against A, TM-score 0.83

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9JKQ2
Elsewhere: UniProt Q9JKQ2 · AlphaFold DB Q9JKQ2

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