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AlphaFold monomer V2.0 prediction for 30S ribosomal protein S16 (P62238)

Analyse AlphaFold monomer V2.0 prediction for 30S ribosomal protein S16 (P62238) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession
P62238
Type
protein
Length
88 residues
Chains
1
Collection
MolNFT v1 / AlphaFold
Contract
0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner
0xF164267A353Fd1c28Ba0a1BF3b7A0eC5C501a949
Molecule
30S ribosomal protein S16
UniProt
P62238

Structure

1 distinct chain · 20% helix, 31% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
A30S ribosomal protein S16protein8820% helix, 31% strandP62238

Compared structures

  • 5J4D · E. coli release factor 1 bound to the 70S ribosome in response to a pseudouridylated stop… · an experimental structure of the same protein · chain A against YA, TM-score 0.92
  • 4V9Q · Crystal Structure of Blasticidin S Bound to Thermus Thermophilus 70S Ribosome. · an experimental structure of the same protein · chain A against BP, TM-score 0.92
  • 6BOH · Antibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound… · an experimental structure of the same protein · chain A against ZA, TM-score 0.92
  • 4V67 · Crystal structure of a translation termination complex formed with release factor RF2. · an experimental structure of the same protein · chain A against AP, TM-score 0.92
  • 6BOK · E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome · an experimental structure of the same protein · chain A against XA, TM-score 0.92
  • 4KVB · Thermus thermophilus HB27 30S ribosomal subunit lacking ribosomal protein S17 · an experimental structure of the same protein · chain A against P, TM-score 0.92
  • 4KVB · Thermus thermophilus HB27 30S ribosomal subunit lacking ribosomal protein S17 · an experimental structure of the same protein · chain A against P, TM-score 0.92
  • 4V9N · Crystal structure of the 70S ribosome bound with the Q253P mutant of release factor RF2. · an experimental structure of the same protein · chain A against AP, TM-score 0.92
  • 4ZER · Crystal structure of the Onc112 antimicrobial peptide bound to the Thermus thermophilus… · an experimental structure of the same protein · chain A against 2p, TM-score 0.92
  • 4V83 · Crystal structure of a complex containing domain 3 from the PSIV IGR IRES RNA bound to… · an experimental structure of the same protein · chain A against AP, TM-score 0.92

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