Research workbench
AlphaFold monomer V2.0 prediction for 30S ribosomal protein S15 (Q9V2K9)
Analyse AlphaFold monomer V2.0 prediction for 30S ribosomal protein S15 (Q9V2K9) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9V2K9
- Type
- protein
- Length
- 158 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7c7eF5512E51Bcd3d8e1379AFF339AD78CFbD034
- Molecule
- 30S ribosomal protein S15
- UniProt
- Q9V2K9
- Pockets
- 1 · best druggability 0.42
Structure
1 distinct chain · 52% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 30S ribosomal protein S15 | protein | 158 | 52% helix, 3% strand | Q9V2K9 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 133 | 0.42 | 0.75 | 28 | empty |
Compared structures
- 5JB3 · Cryo-EM structure of a full archaeal ribosomal translation initiation complex in the… · an experimental structure of the same protein · chain A against Q, TM-score 0.88
- 5JB3 · Cryo-EM structure of a full archaeal ribosomal translation initiation complex in the… · an experimental structure of the same protein · chain A against Q, TM-score 0.88
- 7ZHG · High-resolution cryo-EM structure of pyrococcus abyssi 30S ribosomal subunit bound to… · an experimental structure of the same protein · chain A against Q, TM-score 0.87
- 7ZHG · High-resolution cryo-EM structure of Pyrococcus abyssi 30S ribosomal subunit bound to… · an experimental structure of the same protein · chain A against Q, TM-score 0.87
- 7ZAG · Cryo-EM structure of a pyrococcus abyssi 30S bound to met-initiator TRNA,MRNA, AIF1A and… · an experimental structure of the same protein · chain A against Q, TM-score 0.87
- 7ZAG · Cryo-EM structure of a Pyrococcus abyssi 30S bound to Met-initiator tRNA,mRNA, aIF1A and… · an experimental structure of the same protein · chain A against Q, TM-score 0.87
- 7ZAH · Cryo-EM structure of an archaeal AIF5B bound to the ssu translation initiation complex · an experimental structure of the same protein · chain A against Q, TM-score 0.87
- 7ZAH · Cryo-EM structure of a Pyrococcus abyssi 30S bound to Met-initiator tRNA, mRNA, aIF1A and… · an experimental structure of the same protein · chain A against Q, TM-score 0.87
- 6SWD · IC2 body model of cryo-EM structure of a full archaeal ribosomal translation initiation… · an experimental structure of the same protein · chain A against Q, TM-score 0.87
- 6SWD · IC2 body model of cryo-EM structure of a full archaeal ribosomal translation initiation… · an experimental structure of the same protein · chain A against Q, TM-score 0.87
- 7ZAI · Cryo-EM structure of a pyrococcus abyssi 30S bound to met-initiator tRNA, mRNA and AIF1A. · an experimental structure of the same protein · chain A against Q, TM-score 0.87
- 7ZAI · Cryo-EM structure of a Pyrococcus abyssi 30S bound to Met-initiator tRNA, mRNA and aIF1A. · an experimental structure of the same protein · chain A against Q, TM-score 0.87
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9V2K9
- Elsewhere: UniProt Q9V2K9 · AlphaFold DB Q9V2K9
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