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AlphaFold monomer V2.0 prediction for 30S ribosomal protein S12 (Q5SHN3)

Analyse AlphaFold monomer V2.0 prediction for 30S ribosomal protein S12 (Q5SHN3) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession
Q5SHN3
Type
protein
Length
132 residues
Chains
1
Collection
MolNFT v1 / AlphaFold
Contract
0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner
0x79a905d858Ce72991FD6E7a9C6498620f42E146D
Molecule
30S ribosomal protein S12
UniProt
Q5SHN3

Structure

1 distinct chain · 16% helix, 27% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
A30S ribosomal protein S12protein13216% helix, 27% strandQ5SHN3

Compared structures

  • 6OXA · Dimeric E.coli YoeB bound to Thermus thermophilus 70S pre-cleavage (AAU) · an experimental structure of the same protein · chain A against QL, TM-score 0.92
  • 6OTR · Dimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (AAU) · an experimental structure of the same protein · chain A against QL, TM-score 0.92
  • 6OXI · Dimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (UAA) · an experimental structure of the same protein · chain A against QL, TM-score 0.92
  • 6QNR · 70S ribosome elongation complex (EC) with experimentally assigned potassium ions · an experimental structure of the same protein · chain A against 3A, TM-score 0.92
  • 4V5R · The crystal structure of EF-Tu and Trp-tRNA-Trp bound to a cognate codon on the 70S… · an experimental structure of the same protein · chain A against AL, TM-score 0.92
  • 7AZO · 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977 · an experimental structure of the same protein · chain A against S12B, TM-score 0.92
  • 4ZSN · 70S-wild-type HigB toxin complex bound to a AAA lysine codon · an experimental structure of the same protein · chain A against XL, TM-score 0.92
  • 4YZV · Precleavage 70S structure of the P. vulgaris HigB deltaH92 toxin bound to the ACA codon · an experimental structure of the same protein · chain A against XL, TM-score 0.92
  • 4V87 · Crystal structure analysis of ribosomal decoding. · an experimental structure of the same protein · chain A against BO, TM-score 0.92
  • 7V2P · T.thermophilus 30S ribosome with KsgA, class K5 · an experimental structure of the same protein · chain A against L, TM-score 0.92

Analyse

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