UniProt Q5SHN3
30S ribosomal protein S12 (Q5SHN3)
30S ribosomal protein S12 (UniProt Q5SHN3): 360 experimental structures and 1 predicted model on GenesisL1, 4 ligands bound, 136 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- Q5SHN3
- Protein
- 30S ribosomal protein S12
- Experimental structures
- 360
- Predicted models
- 1
- Ligands
- 4
- Pockets
- 136 · 81 records with a druggable one
Structures
361 records of Q5SHN3 in the MolNFT archive: 360 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 1JGO | The Path of Messenger RNA Through the Ribosome. THIS FILE, 1JGO, CONTAINS THE 30S RIBOSOME SUBUNIT… | x-ray diffraction | O | — | — |
| 1JGO | The path of messenger RNA through the ribosome. this file, 1JGO, contains the 30S ribosome subunit… | x-ray diffraction | O | — | — |
| 1JGP | The Path of Messenger RNA Through the Ribosome. THIS FILE, 1JGP, CONTAINS THE 30S RIBOSOME SUBUNIT… | x-ray diffraction | O | — | — |
| 1JGP | The path of messenger RNA through the ribosome. this file, 1JGP, contains the 30S ribosome subunit… | x-ray diffraction | O | — | — |
| 1JGQ | The Path of Messenger RNA Through the Ribosome. THIS FILE, 1JGQ, CONTAINS THE 30S RIBOSOME SUBUNIT… | x-ray diffraction | O | — | — |
| 1JGQ | The path of messenger RNA through the ribosome. this file, 1JGQ, contains the 30S ribosome subunit… | x-ray diffraction | O | — | — |
| 1MVR | Decoding Center & Peptidyl transferase center from the X-ray structure of the Thermus thermophilus… | electron microscopy | O | — | 1 (best 0.35) |
| 1MVR | Decoding center & peptidyl transferase center from the X-ray structure of the thermus thermophilus… | electron microscopy | O | — | — |
| 1N34 | Structure of the Thermus thermophilus 30S ribosomal subunit in the presence of codon and… | x-ray diffraction | L | — | 3 (best 0.87) |
| 1N34 | Structure of the thermus thermophilus 30S ribosomal subunit in the presence of codon and… | x-ray diffraction | L | — | — |
| 1N36 | Structure of the Thermus thermophilus 30S ribosomal subunit in the presence of crystallographically… | x-ray diffraction | L | — | 3 (best 0.84) |
| 1N36 | Structure of the thermus thermophilus 30S ribosomal subunit in the presence of crystallographically… | x-ray diffraction | L | — | — |
| 1PN7 | Coordinates of S12, L11 proteins and P-tRNA, from the 70S X-ray structure aligned to the 70S… | electron microscopy | O | — | 1 (best 0.35) |
| 1PN7 | Coordinates of S12, L11 proteins and P-tRNA, from the 70S X- ray structure aligned to the 70S… | electron microscopy | O | — | — |
| 1PN8 | Coordinates of S12, L11 proteins and E-site tRNA from 70S crystal structure separately fitted into… | electron microscopy | O | — | 1 (best 0.35) |
| 1PN8 | Coordinates of S12, L11 proteins and E-site tRNA from 70S crystal structure separately fitted into… | electron microscopy | O | — | — |
| 1QZC | Coordinates of S12, SH44, LH69 and SRL separately fitted into the cryo-EM map of EF-Tu ternary… | electron microscopy | L | — | 1 (best 0.31) |
| 1QZC | Coordinates of S12, SH44, LH69 and srl separately fitted into the cryo-EM MAP of ef-tu ternary… | electron microscopy | L | — | — |
| 1VVJ | Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the Ribosome | x-ray diffraction | QL, XL | MG | — |
| 1VY4 | Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond… | x-ray diffraction | AL, CL | MG | 1 (best 0.87) |
| 1VY5 | Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide… | x-ray diffraction | AL, CL | MG | — |
| 1VY6 | Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond… | x-ray diffraction | AL, CL | MG | — |
| 1VY7 | Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond… | x-ray diffraction | AL, CL | MG | — |
| 2E5L | A snapshot of the 30S ribosomal subunit capturing mRNA via the Shine- Dalgarno interaction | x-ray diffraction | L | — | — |
| 2E5L | A snapshot of the 30S ribosomal subunit capturing mRNA via the shine- dalgarno interaction | x-ray diffraction | L | — | — |
| 2UU9 | Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a Valine-ASL with cmo5U… | x-ray diffraction | L | — | — |
| 2UU9 | Structure of the thermus thermophilus 30S ribosomal subunit complexed with a valine-asl with CMO5U… | x-ray diffraction | L | — | — |
| 2UUA | Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a Valine-ASL with cmo5U… | x-ray diffraction | L | — | — |
| 2UUA | Structure of the thermus thermophilus 30S ribosomal subunit complexed with a valine-asl with CMO5U… | x-ray diffraction | L | — | — |
| 2UUB | Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a Valine-ASL with cmo5U… | x-ray diffraction | L | — | — |
| 2UUB | Structure of the thermus thermophilus 30S ribosomal subunit complexed with a valine-asl with CMO5U… | x-ray diffraction | L | — | — |
| 2UUC | Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a Valine-ASL with cmo5U… | x-ray diffraction | L | — | — |
| 2UUC | Structure of the thermus thermophilus 30S ribosomal subunit complexed with a valine-asl with CMO5U… | x-ray diffraction | L | — | — |
| 2UXB | Crystal structure of an extended tRNA anticodon stem loop in complex with its cognate mRNA GGGU in… | x-ray diffraction | L | — | — |
| 2UXB | Crystal structure of an extended tRNA anticodon stem loop in complex with its cognate mRNA gggu in… | x-ray diffraction | L | — | — |
| 2UXC | Crystal structure of an extended tRNA anticodon stem loop in complex with its cognate mRNA UCGU in… | x-ray diffraction | L | — | — |
| 2UXC | Crystal structure of an extended tRNA anticodon stem loop in complex with its cognate mRNA ucgu in… | x-ray diffraction | L | — | — |
| 2UXD | Crystal structure of an extended tRNA anticodon stem loop in complex with its cognate mRNA CGGG in… | x-ray diffraction | L | — | — |
| 2UXD | Crystal structure of an extended tRNA anticodon stem loop in complex with its cognate mRNA cggg in… | x-ray diffraction | L | — | — |
| 2VQE | Modified uridines with C5-methylene substituents at the first position of the tRNA anticodon… | x-ray diffraction | L | — | — |
| 2VQE | Modified uridines with C5-methylene substituents at the first position of the tRNA anticodon… | x-ray diffraction | L | — | — |
| 2VQF | Modified uridines with C5-methylene substituents at the first position of the tRNA anticodon… | x-ray diffraction | L | — | — |
| 2VQF | Modified uridines with C5-methylene substituents at the first position of the tRNA anticodon… | x-ray diffraction | L | — | — |
| 2ZM6 | Crystal structure of the Thermus thermophilus 30S ribosomal subunit | x-ray diffraction | L | — | — |
| 2ZM6 | Crystal structure of the thermus thermophilus 30S ribosomal subunit | x-ray diffraction | L | — | — |
| 3T1H | Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a human anti-codon stem… | x-ray diffraction | L | — | — |
| 3T1H | Structure of the thermus thermophilus 30S ribosomal subunit complexed with a human anti-codon stem… | x-ray diffraction | L | — | — |
| 3T1Y | Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a human anti-codon stem… | x-ray diffraction | L | — | — |
| 3T1Y | Structure of the thermus thermophilus 30S ribosomal subunit complexed with a human anti-codon stem… | x-ray diffraction | L | — | — |
| 4B3M | Crystal structure of the 30S ribosome in complex with compound 1 | x-ray diffraction | L | — | — |
| 4B3M | Crystal structure of the 30S ribosome in complex with compound 1 | x-ray diffraction | L | — | — |
| 4B3R | Crystal structure of the 30S ribosome in complex with compound 30 | x-ray diffraction | L | — | — |
| 4B3R | Crystal structure of the 30S ribosome in complex with compound 30 | x-ray diffraction | L | — | — |
| 4B3S | Crystal structure of the 30S ribosome in complex with compound 37 | x-ray diffraction | L | — | — |
| 4B3S | Crystal structure of the 30S ribosome in complex with compound 37 | x-ray diffraction | L | — | — |
| 4B3T | Crystal structure of the 30S ribosome in complex with compound 39 | x-ray diffraction | L | — | — |
| 4B3T | Crystal structure of the 30S ribosome in complex with compound 39 | x-ray diffraction | L | — | — |
| 4GKJ | Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a human mitochondrial… | x-ray diffraction | L | — | — |
| 4GKJ | Structure of the thermus thermophilus 30S ribosomal subunit complexed with a human mitochondrial… | x-ray diffraction | L | — | — |
| 4GKK | Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a human mitochondrial… | x-ray diffraction | L | — | — |
301 records more on the page itself.
Ligands
- MG · Magnesium ion · in 172 records
- K · Potassium ion · in 4 records
- OHX · osmium (III) hexammine · in 2 records
- LUJ · (1R,2R,3S,4R,6S)-4,6-diamino-2-{[3-O-(2,6-diamino-2,6-dideoxy-beta-L-idopyranosyl)-beta-D-ribofuranosyl]oxy}-3-hydroxyc yclohexyl 2-amino-2,4-dideoxy-4-propyl-alpha-D-glucopyranoside · in 1 record
Experiment against prediction
- 8FC6 chain 1l against the predicted model Q5SHN3: TM-score 0.98, RMSD 0.53 Å
- 5J8B chain l against the predicted model Q5SHN3: TM-score 0.98, RMSD 0.52 Å
- 6CAE chain 1l against the predicted model Q5SHN3: TM-score 0.98, RMSD 0.52 Å
- 8VTX chain 1l against the predicted model Q5SHN3: TM-score 0.98, RMSD 0.53 Å
- 8G29 chain 2l against the predicted model Q5SHN3: TM-score 0.98, RMSD 0.53 Å
- 8G29 chain 1l against the predicted model Q5SHN3: TM-score 0.98, RMSD 0.53 Å
- 8UD7 chain 1l against the predicted model Q5SHN3: TM-score 0.98, RMSD 0.53 Å
- 8FC5 chain 1l against the predicted model Q5SHN3: TM-score 0.98, RMSD 0.53 Å
- 6XHY chain 1l against the predicted model Q5SHN3: TM-score 0.98, RMSD 0.53 Å
- 8G2C chain 1l against the predicted model Q5SHN3: TM-score 0.98, RMSD 0.54 Å
Elsewhere
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