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AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit K (Q8U0E8)

Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit K… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession
Q8U0E8
Type
protein
Length
57 residues
Chains
1
Collection
MolNFT v1 / AlphaFold
Contract
0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner
0x40ceAE928a79502748126799cBFF9492DaA1C4BA
Molecule
DNA-directed RNA polymerase subunit K
UniProt
Q8U0E8

Structure

1 distinct chain · 46% helix, 0% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ADNA-directed RNA polymerase subunit Kprotein5746% helix, 0% strandQ8U0E8

Compared structures

  • 8CRO · Cryo-EM structure of Pyrococcus furiosus transcription elongation complex · an experimental structure of the same protein · chain A against K, TM-score 0.93
  • 8RBO · Cryo-EM structure of Pyrococcus furiosus apo form RNA polymerase contracted clamp… · an experimental structure of the same protein · chain A against K, TM-score 0.92
  • 8ORQ · Cryo-EM structure of Pyrococcus furiosus apo form RNA polymerase open clamp conformation · an experimental structure of the same protein · chain A against K, TM-score 0.91
  • 8P2I · Cryo-EM structure of Pyrococcus furiosus apo form RNA polymerase contracted clamp… · an experimental structure of the same protein · chain A against K, TM-score 0.90
  • 8OKI · Cryo-EM structure of Pyrococcus furiosus transcription elongation complex bound to Spt4/5 · an experimental structure of the same protein · chain A against K, TM-score 0.90

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