AlphaFold monomer V2.0 prediction for 26S proteasome regulatory subunit RPN7 (Q06103)

Structure

1 distinct chain · 70% helix, 3% strand (DSSP).

Pockets

4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.

Compared structures

• 6FVU · 26S proteasome, s2 state · an experimental structure of the same protein · chain A against R, TM-score 0.89
• 7QO5 · 26S proteasome Rpt1-RK -Ubp6-UbVS complex in the si state · an experimental structure of the same protein · chain A against R, TM-score 0.89
• 6FVX · 26S proteasome, s5 state · an experimental structure of the same protein · chain A against R, TM-score 0.89
• 6FVV · 26S proteasome, s3 state · an experimental structure of the same protein · chain A against R, TM-score 0.88
• 6FVT · 26S proteasome, s1 state · an experimental structure of the same protein · chain A against R, TM-score 0.88
• 7QO3 · Structure of the 26S proteasome-Ubp6 complex in the si state (Core Particle and Lid) · an experimental structure of the same protein · chain A against R, TM-score 0.88
• 7QO3 · Structure of the 26S proteasome-UBP6 complex in the si state (core particle and lid) · an experimental structure of the same protein · chain A against R, TM-score 0.88
• 6FVY · 26S proteasome, s6 state · an experimental structure of the same protein · chain A against R, TM-score 0.88
• 6FVW · 26S proteasome, s4 state · an experimental structure of the same protein · chain A against R, TM-score 0.87
• 6J2Q · Yeast proteasome in Ub-accepted state (C1-b) · an experimental structure of the same protein · chain A against R, TM-score 0.85
• 6J2X · Yeast proteasome in resting state (C1-a) · an experimental structure of the same protein · chain A against R, TM-score 0.85
• 3JCO · Structure of yeast 26S proteasome in M1 state derived from Titan dataset · an experimental structure of the same protein · chain A against R, TM-score 0.85

Analyse

• Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
• Every structure of UniProt Q06103
• Elsewhere: UniProt Q06103 · AlphaFold DB Q06103