AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase III subunit RPC6 (Q9H1D9)

Structure

1 distinct chain · 50% helix, 15% strand (DSSP).

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Compared structures

• 8IUH · RNA polymerase III pre-initiation complex open complex 1 · an experimental structure of the same protein · chain A against P, TM-score 0.60
• 8IUE · RNA polymerase III pre-initiation complex melting complex 1 · an experimental structure of the same protein · chain A against P, TM-score 0.59
• 8ITY · human RNA polymerase III pre-initiation complex closed DNA 1 · an experimental structure of the same protein · chain A against P, TM-score 0.55
• 7A6H · Cryo-EM structure of human apo RNA polymerase III · an experimental structure of the same protein · chain A against P, TM-score 0.34
• 7A6H · Cryo-EM structure of human apo RNA Polymerase III · an experimental structure of the same protein · chain A against P, TM-score 0.34
• 7AE3 · Cryo-EM structure of human RNA Polymerase III elongation complex 3 · an experimental structure of the same protein · chain A against P, TM-score 0.34
• 7AE3 · Cryo-EM structure of human RNA polymerase III elongation complex 3 · an experimental structure of the same protein · chain A against P, TM-score 0.34
• 7AEA · Cryo-EM structure of human RNA polymerase III elongation complex 2 · an experimental structure of the same protein · chain A against P, TM-score 0.34
• 7AEA · Cryo-EM structure of human RNA Polymerase III elongation complex 2 · an experimental structure of the same protein · chain A against P, TM-score 0.34
• 7AE1 · Cryo-EM structure of human RNA Polymerase III elongation complex 1 · an experimental structure of the same protein · chain A against P, TM-score 0.34
• 7AE1 · Cryo-EM structure of human RNA polymerase III elongation complex 1 · an experimental structure of the same protein · chain A against P, TM-score 0.34
• 7D58 · Cryo-EM structure of human RNA polymerase III in elongating state · an experimental structure of the same protein · chain A against P, TM-score 0.31

Analyse

• Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
• Every structure of UniProt Q9H1D9
• Elsewhere: UniProt Q9H1D9 · AlphaFold DB Q9H1D9