Research workbench
AlphaFold monomer V2.0 prediction for E3 ubiquitin-protein ligase RNF4 (O88846)
Analyse AlphaFold monomer V2.0 prediction for E3 ubiquitin-protein ligase RNF4 (O88846) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- O88846
- Type
- protein
- Length
- 194 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5c4adF1416281C09AE8eE1cbb80fF7e44cE86F97
- Molecule
- E3 ubiquitin-protein ligase RNF4
- UniProt
- O88846
Structure
1 distinct chain · 8% helix, 7% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | E3 ubiquitin-protein ligase RNF4 | protein | 194 | 8% helix, 7% strand | O88846 |
Compared structures
- 4AP4 · Rnf4 - ubch5a - ubiquitin heterotrimeric complex · an experimental structure of the same protein · chain A against A, TM-score 0.33
- 4AP4 · RNF4 - UBCH5A - ubiquitin heterotrimeric complex · an experimental structure of the same protein · chain A against A, TM-score 0.33
- 5AIT · A complex of of RNF4-ring domain, UBEV2, UBC13-ub (isopeptide crosslink) · an experimental structure of the same protein · chain A against A, TM-score 0.33
- 5AIT · A complex of of RNF4-RING domain, UbeV2, Ubc13-Ub (isopeptide crosslink) · an experimental structure of the same protein · chain A against A, TM-score 0.33
- 5AIU · A complex of RNF4-RING domain, Ubc13-Ub (isopeptide crosslink) · an experimental structure of the same protein · chain A against A, TM-score 0.31
- 5AIU · A complex of RNF4-ring domain, UBC13-ub (isopeptide crosslink) · an experimental structure of the same protein · chain A against A, TM-score 0.31
- 3NG2 · Crystal structure of the RNF4 ring domain dimer · an experimental structure of the same protein · chain A against B, TM-score 0.29
- 3NG2 · Crystal structure of the RNF4 ring domain dimer · an experimental structure of the same protein · chain A against B, TM-score 0.29
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O88846
- Elsewhere: UniProt O88846 · AlphaFold DB O88846
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