Research workbench
AlphaFold monomer V2.0 prediction for 60S ribosomal protein L31-a (P0C2H8)
Analyse AlphaFold monomer V2.0 prediction for 60S ribosomal protein L31-a (P0C2H8) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P0C2H8
- Type
- protein
- Length
- 113 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x40B9C9d5F084D34d026E9d5Dd10501AcdF6d6152
- Molecule
- 60S ribosomal protein L31-a
- UniProt
- P0C2H8
- Pockets
- 1 · best druggability 0.29
Structure
1 distinct chain · 28% helix, 28% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 60S ribosomal protein L31-a | protein | 113 | 28% helix, 28% strand | P0C2H8 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 50 | 0.29 | 0.76 | 18 | empty |
Compared structures
- 7ZW0 · FAP-80S Complex - Rotated state · an experimental structure of the same protein · chain A against Lg, TM-score 0.94
- 7UQB · Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a… · an experimental structure of the same protein · chain A against d, TM-score 0.94
- 6TB3 · yeast 80S ribosome in complex with the Not5 subunit of the CCR4-NOT complex · an experimental structure of the same protein · chain A against BC, TM-score 0.94
- 8HFR · NPC-trapped pre-60S particle · an experimental structure of the same protein · chain A against dG, TM-score 0.93
- 7UOO · Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state · an experimental structure of the same protein · chain A against d, TM-score 0.93
- 7U0H · State NE1 nucleolar 60S ribosome biogenesis intermediate - Overall model · an experimental structure of the same protein · chain A against d, TM-score 0.93
- 7UQZ · Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a SPB1… · an experimental structure of the same protein · chain A against d, TM-score 0.93
- 8EVT · Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome… · an experimental structure of the same protein · chain A against Ad, TM-score 0.93
- 7V08 · Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a Spb1… · an experimental structure of the same protein · chain A against d, TM-score 0.93
- 8AGU · Yeast RQC complex in state E · an experimental structure of the same protein · chain A against Q, TM-score 0.93
- 8AAF · Yeast RQC complex in state G · an experimental structure of the same protein · chain A against Q, TM-score 0.93
- 8AGT · Yeast RQC complex in state F · an experimental structure of the same protein · chain A against Q, TM-score 0.93
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0C2H8
- Elsewhere: UniProt P0C2H8 · AlphaFold DB P0C2H8
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