AlphaFold monomer V2.0 prediction for 50S ribosomal protein L13 (A0QSP8)

Structure

1 distinct chain · 33% helix, 18% strand (DSSP).

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Compared structures

• 8WHX · Cryo- EM structure of Mycobacterium smegmatis 70S ribosome and RafH. · an experimental structure of the same protein · chain A against M, TM-score 0.95
• 8WI8 · Cryo- EM structure of Mycobacterium smegmatis 50S ribosomal subunit (body 1) of 70S… · an experimental structure of the same protein · chain A against M, TM-score 0.95
• 8WI7 · Cryo- EM structure of Mycobacterium smegmatis 70S ribosome, bS1 and RafH. · an experimental structure of the same protein · chain A against M, TM-score 0.95
• 8WIB · Cryo- EM structure of Mycobacterium smegmatis 70S ribosome, E- tRNA and RafH. · an experimental structure of the same protein · chain A against M, TM-score 0.95
• 5O60 · Structure of the 50S large ribosomal subunit from mycobacterium smegmatis · an experimental structure of the same protein · chain A against K, TM-score 0.95
• 8XZ3 · Mycobacterium smegmatis 50S ribosomal subunit with Erythromycin · an experimental structure of the same protein · chain A against K, TM-score 0.95
• 5ZEP · M. smegmatis hibernating state 70S ribosome structure · an experimental structure of the same protein · chain A against K, TM-score 0.95
• 5ZET · M. smegmatis P/P state 50S ribosomal subunit · an experimental structure of the same protein · chain A against K, TM-score 0.95
• 7Y41 · Mycobacterium smegmatis 50S ribosomal subunit from Log Phase of growth · an experimental structure of the same protein · chain A against K, TM-score 0.95
• 8V9L · Cryo-EM structure of the Mycobacterium smegmatis 70S ribosome in complex with hibernation… · an experimental structure of the same protein · chain A against L, TM-score 0.94
• 8V9J · Cryo-EM structure of the Mycobacterium smegmatis 70S ribosome in complex with hibernation… · an experimental structure of the same protein · chain A against L, TM-score 0.94
• 5XYM · Large subunit of mycobacterium smegmatis · an experimental structure of the same protein · chain A against J, TM-score 0.94

Analyse

• Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
• Every structure of UniProt A0QSP8
• Elsewhere: UniProt A0QSP8 · AlphaFold DB A0QSP8