UniProt A0QSP8
50S ribosomal protein L13 (A0QSP8)
50S ribosomal protein L13 (UniProt A0QSP8): 25 experimental structures and 1 predicted model on GenesisL1, 1 ligand bound, 33 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- A0QSP8
- Protein
- 50S ribosomal protein L13
- Experimental structures
- 25
- Predicted models
- 1
- Ligands
- 1
- Pockets
- 33 · 18 records with a druggable one
Structures
26 records of A0QSP8 in the MolNFT archive: 25 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 5O60 | Structure of the 50S large ribosomal subunit from mycobacterium smegmatis | electron microscopy | K | — | — |
| 5O61 | The complete structure of the Mycobacterium smegmatis 70S ribosome | electron microscopy | K | MG | 1 (best 0.84) |
| 5XYM | Large subunit of Mycobacterium smegmatis | electron microscopy | J | MG | 1 (best 0.83) |
| 5XYM | Large subunit of mycobacterium smegmatis | electron microscopy | J | MG | — |
| 5ZEB | M. Smegmatis P/P state 70S ribosome structure | electron microscopy | K | — | 2 (best 0.86) |
| 5ZEP | M. smegmatis hibernating state 70S ribosome structure | electron microscopy | K | — | 1 (best 0.86) |
| 5ZET | M. smegmatis P/P state 50S ribosomal subunit | electron microscopy | K | — | — |
| 5ZET | M. smegmatis P/P state 50S ribosomal subunit | electron microscopy | K | — | — |
| 6DZI | Cryo-EM Structure of Mycobacterium smegmatis 70S C(minus) ribosome 70S-MPY complex | electron microscopy | K | — | 1 (best 0.87) |
| 6DZP | Cryo-EM Structure of Mycobacterium smegmatis C(minus) 50S ribosomal subunit | electron microscopy | K | — | 2 (best 0.85) |
| 6DZP | Cryo-EM structure of mycobacterium smegmatis C(MINUS) 50S ribosomal subunit | electron microscopy | K | — | — |
| 7XAM | Mycobacterium smegmatis 50S ribosomal subunit from Stationary phase of growth | electron microscopy | K | — | 2 (best 0.82) |
| 7Y41 | Mycobacterium smegmatis 50S ribosomal subunit from Log Phase of growth | electron microscopy | K | MG | 4 (best 0.86) |
| 8FR8 | Structure of Mycobacterium smegmatis Rsh bound to a 70S translation initiation complex | electron microscopy | T | — | 1 (best 0.84) |
| 8KAB | Mycobacterium smegmatis 50S ribosomal subunit-HflX complex | electron microscopy | K | — | 1 (best 0.84) |
| 8V9J | Cryo-EM structure of the Mycobacterium smegmatis 70S ribosome in complex with hibernation factor… | electron microscopy | L | — | 1 (best 0.84) |
| 8V9K | Cryo-EM structure of the Mycobacterium smegmatis 70S ribosome in complex with hibernation factor… | electron microscopy | L | — | — |
| 8V9L | Cryo-EM structure of the Mycobacterium smegmatis 70S ribosome in complex with hibernation factor… | electron microscopy | L | — | 1 (best 0.83) |
| 8WHX | Cryo- EM structure of Mycobacterium smegmatis 70S ribosome and RafH. | electron microscopy | M | — | 2 (best 0.88) |
| 8WHY | Cryo- EM structure of Mycobacterium smegmatis 50S ribosomal subunit (body 1) of 70S ribosome and… | electron microscopy | M | — | 3 (best 0.86) |
| 8WI7 | Cryo- EM structure of Mycobacterium smegmatis 70S ribosome, bS1 and RafH. | electron microscopy | M | — | 2 (best 0.86) |
| 8WI8 | Cryo- EM structure of Mycobacterium smegmatis 50S ribosomal subunit (body 1) of 70S ribosome, bS1… | electron microscopy | M | — | 2 (best 0.86) |
| 8WIB | Cryo- EM structure of Mycobacterium smegmatis 70S ribosome, E- tRNA and RafH. | electron microscopy | M | — | 3 (best 0.86) |
| 8WIC | Cryo- EM structure of Mycobacterium smegmatis 50S ribosomal subunit (body 1) of 70S ribosome, E… | electron microscopy | M | — | 2 (best 0.87) |
| 8XZ3 | Mycobacterium smegmatis 50S ribosomal subunit with Erythromycin | electron microscopy | K | — | — |
| A0QSP8 | AlphaFold monomer V2.0 prediction for 50S ribosomal protein L13 (A0QSP8) | predicted | A | — | 1 (best 0.39) |
Ligands
- MG · Magnesium ion · in 4 records
Experiment against prediction
- 8WHX chain M against the predicted model A0QSP8: TM-score 0.96, RMSD 1.20 Å
- 8KAB chain K against the predicted model A0QSP8: TM-score 0.96, RMSD 1.22 Å
- 8WHY chain M against the predicted model A0QSP8: TM-score 0.96, RMSD 1.21 Å
- 8WI8 chain M against the predicted model A0QSP8: TM-score 0.95, RMSD 1.22 Å
- 8WI7 chain M against the predicted model A0QSP8: TM-score 0.95, RMSD 1.22 Å
- 8WIC chain M against the predicted model A0QSP8: TM-score 0.95, RMSD 1.22 Å
- 8WIB chain M against the predicted model A0QSP8: TM-score 0.95, RMSD 1.22 Å
- 5O60 chain K against the predicted model A0QSP8: TM-score 0.95, RMSD 1.23 Å
- 7XAM chain K against the predicted model A0QSP8: TM-score 0.95, RMSD 1.25 Å
- 8FR8 chain T against the predicted model A0QSP8: TM-score 0.95, RMSD 1.18 Å
Elsewhere
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