AlphaFold monomer V2.0 prediction for 50S ribosomal protein L10 (P42923)

Structure

1 distinct chain · 57% helix, 15% strand (DSSP).

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Compared structures

• 7OPE · RqcH DR variant bound to 50S-peptidyl-tRNA-RqcP RQC complex (rigid body refinement) · an experimental structure of the same protein · chain A against L, TM-score 0.65
• 7OPE · Rqch dr variant bound to 50S-peptidyl-tRNA-rqcp rqc complex (rigid body refinement) · an experimental structure of the same protein · chain A against L, TM-score 0.65
• 7AS8 · Bacillus subtilis ribosome quality control complex state B. Ribosomal 50S subunit with… · an experimental structure of the same protein · chain A against L, TM-score 0.65
• 7AS8 · Bacillus subtilis ribosome quality control complex state B. ribosomal 50S subunit with… · an experimental structure of the same protein · chain A against L, TM-score 0.65
• 3J9W · Cryo-EM structure of the Bacillus subtilis MifM-stalled ribosome complex · an experimental structure of the same protein · chain A against BJ, TM-score 0.61
• 7O5B · Cryo-EM structure of a Bacillus subtilis MifM-stalled ribosome-nascent chain complex with… · an experimental structure of the same protein · chain A against p, TM-score 0.60
• 7AS9 · Bacillus subtilis ribosome-associated quality control complex state A. Ribosomal 50S… · an experimental structure of the same protein · chain A against L, TM-score 0.60
• 7AS9 · Bacillus subtilis ribosome-associated quality control complex state a. ribosomal 50S… · an experimental structure of the same protein · chain A against L, TM-score 0.60
• 6TNN · Mini-RNase III (Mini-III) bound to 50S ribosome with precursor 23S rRNA · an experimental structure of the same protein · chain A against b, TM-score 0.60
• 6TNN · Mini-RNase III (mini-III) bound to 50S ribosome with precursor 23S rRNA · an experimental structure of the same protein · chain A against b, TM-score 0.60
• 6TPQ · RNase M5 bound to 50S ribosome with precursor 5S rRNA · an experimental structure of the same protein · chain A against b, TM-score 0.59
• 6TPQ · RNase M5 bound to 50S ribosome with precursor 5S rRNA · an experimental structure of the same protein · chain A against b, TM-score 0.59

Analyse

• Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
• Every structure of UniProt P42923
• Elsewhere: UniProt P42923 · AlphaFold DB P42923