Research workbench
AlphaFold monomer V2.0 prediction for rhomboid-related protein 4 (Q8TEB9)
Analyse AlphaFold monomer V2.0 prediction for rhomboid-related protein 4 (Q8TEB9) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8TEB9
- Type
- protein
- Length
- 315 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x141AA1A39322178645a7c5A231A48c595e07A32D
- Molecule
- Rhomboid-related protein 4
- UniProt
- Q8TEB9
- Pockets
- 3 · best druggability 0.67
Structure
1 distinct chain · 60% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Rhomboid-related protein 4 | protein | 315 | 60% helix, 3% strand | Q8TEB9 |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 56 | 0.67 | 0.96 | 19 | empty |
| 2 | 743 | 0.67 | 0.75 | 66 | empty |
| 3 | 69 | 0.33 | 0.75 | 15 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
- 5EPP · Structural insights into the interaction of P97 N-terminus domain and vbm motif in… · an experimental structure of the same protein · chain A against B, TM-score 0.05
- 5EPP · Structural Insights into the Interaction of p97 N-terminus Domain and VBM Motif in… · an experimental structure of the same protein · chain A against B, TM-score 0.05
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8TEB9
- Elsewhere: UniProt Q8TEB9 · AlphaFold DB Q8TEB9
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