Research workbench
AlphaFold monomer V2.0 prediction for RAB11 family-interacting protein 2 (Q7L804)
Analyse AlphaFold monomer V2.0 prediction for RAB11 family-interacting protein 2… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q7L804
- Type
- protein
- Length
- 512 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9073C46348542FfE4327c3F363F9B51B22058e75
- Molecule
- RAB11 family-interacting protein 2
- UniProt
- Q7L804
- Pockets
- 2 · best druggability 0.38
Structure
1 distinct chain · 15% helix, 13% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RAB11 family-interacting protein 2 | protein | 512 | 15% helix, 13% strand | Q7L804 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 116 | 0.38 | 0.74 | 15 | empty |
| 2 | 96 | 0.37 | 0.75 | 12 | empty |
Compared structures
- 2GZH · Crystal structure of RAB11 in complex with RAB11-family interacting protein 2 · an experimental structure of the same protein · chain A against B, TM-score 0.10
- 2GZH · Crystal Structure of Rab11 in Complex with Rab11-Family Interacting Protein 2 · an experimental structure of the same protein · chain A against B, TM-score 0.10
- 4C4P · Crystal structure of wild-type RAB11 complexed to FIP2 · an experimental structure of the same protein · chain A against B, TM-score 0.10
- 4C4P · Crystal Structure of Wild-Type Rab11 Complexed to FIP2 · an experimental structure of the same protein · chain A against B, TM-score 0.10
- 3TSO · Structure of the cancer associated RAB25 protein in complex with FIP2 · an experimental structure of the same protein · chain A against C, TM-score 0.10
- 3TSO · Structure of the cancer associated Rab25 protein in complex with FIP2 · an experimental structure of the same protein · chain A against C, TM-score 0.10
- 6S8X · Crystal structure of the rab-binding domain of FIP2 · an experimental structure of the same protein · chain A against A, TM-score 0.08
- 6S8X · Crystal structure of the Rab-binding domain of FIP2 · an experimental structure of the same protein · chain A against A, TM-score 0.08
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q7L804
- Elsewhere: UniProt Q7L804 · AlphaFold DB Q7L804
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