Research workbench

AlphaFold monomer V2.0 prediction for retinol-binding protein 3 (Q7SZI7)

Analyse AlphaFold monomer V2.0 prediction for retinol-binding protein 3 (Q7SZI7) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: Q7SZI7
Type: protein
Length: 1,219 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x768fbC4124BfF53721BeAa8519dEa78111cF6A4C
Molecule: Retinol-binding protein 3
UniProt: Q7SZI7
Pockets: 14 · best druggability 0.82

Structure

1 distinct chain · 37% helix, 21% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Retinol-binding protein 3	protein	1219	37% helix, 21% strand	Q7SZI7

Pockets

14 pockets found on a 1 Å grid, 7 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	187	0.82	0.95	27	empty
2	209	0.75	0.89	33	empty
3	106	0.71	0.92	22	empty
4	52	0.65	0.95	17	empty
5	363	0.57	0.75	55	empty

Compared structures

1J7X · Crystal structure of a functional unit of interphotoreceptor retinoid-binding protein… · an experimental structure of the same protein · chain A against A, TM-score 0.24
1J7X · Crystal structure of a functional unit of interphotoreceptor retinoid-binding protein… · an experimental structure of the same protein · chain A against A, TM-score 0.24

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q7SZI7
Elsewhere: UniProt Q7SZI7 · AlphaFold DB Q7SZI7

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